Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU364127 |
| length | 724 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G307293 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 14051835 ~ 14058202 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU364094 | lncRNA | upstream | 35441 | 14015162 ~ 14016394 (+) | True | G307262 |
| TU364104 | lncRNA | upstream | 48004 | 14003608 ~ 14003831 (+) | True | G307272 |
| XR_004580226.1 | lncRNA | upstream | 91645 | 13940426 ~ 13960190 (+) | True | LOC117599900 |
| TU364036 | lncRNA | upstream | 358923 | 13691106 ~ 13692912 (+) | False | ippk |
| TU363977 | lncRNA | upstream | 527781 | 13522009 ~ 13524054 (+) | True | G307161 |
| TU364114 | lncRNA | downstream | 38068 | 14096270 ~ 14096786 (+) | True | G307281 |
| TU364494 | lncRNA | downstream | 89939 | 14148141 ~ 14148445 (+) | True | G307588 |
| XR_004580186.1 | lncRNA | downstream | 525365 | 14583567 ~ 14590821 (+) | True | LOC117599878 |
| TU364901 | lncRNA | downstream | 530823 | 14589025 ~ 14589232 (+) | True | G307971 |
| TU364909 | lncRNA | downstream | 540191 | 14598393 ~ 14598612 (+) | True | G307976 |
| XM_026932816.2 | mRNA | upstream | 112013 | 13852220 ~ 13939822 (+) | True | stab1 |
| XM_026932641.2 | mRNA | upstream | 205203 | 13816856 ~ 13846632 (+) | True | nisch |
| XM_026932644.2 | mRNA | upstream | 218350 | 13816855 ~ 13833485 (+) | False | nisch |
| XM_026932632.2 | mRNA | downstream | 7419 | 14065621 ~ 14080135 (+) | True | rbck1 |
| XM_026932633.2 | mRNA | downstream | 9163 | 14067365 ~ 14080135 (+) | False | rbck1 |
| XM_034314000.1 | mRNA | downstream | 33733 | 14091935 ~ 14096019 (+) | True | bloc1s1 |
| XM_026932805.2 | mRNA | downstream | 43853 | 14102055 ~ 14112510 (+) | False | rdh5 |
| XM_026932804.2 | mRNA | downstream | 43853 | 14102055 ~ 14112510 (+) | False | rdh5 |
| TU363207 | other | upstream | 1589299 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 2536022 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 2570735 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 2725475 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 2736399 | 11314184 ~ 11315436 (+) | True | G305863 |
| XR_004580240.1 | other | downstream | 312586 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 456408 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 2431159 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 2431159 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 3202777 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
