Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU364869 |
| length | 497 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 3 |
| gene id | gpd1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 14514592 ~ 14524976 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU364494 | lncRNA | upstream | 366165 | 14148141 ~ 14148445 (+) | True | G307588 |
| TU364114 | lncRNA | upstream | 417824 | 14096270 ~ 14096786 (+) | True | G307281 |
| TU364127 | lncRNA | upstream | 456408 | 14051835 ~ 14058202 (+) | True | G307293 |
| TU364094 | lncRNA | upstream | 498216 | 14015162 ~ 14016394 (+) | True | G307262 |
| TU364104 | lncRNA | upstream | 510779 | 14003608 ~ 14003831 (+) | True | G307272 |
| XR_004580186.1 | lncRNA | downstream | 62420 | 14583567 ~ 14590821 (+) | True | LOC117599878 |
| TU364901 | lncRNA | downstream | 67878 | 14589025 ~ 14589232 (+) | True | G307971 |
| TU364909 | lncRNA | downstream | 77246 | 14598393 ~ 14598612 (+) | True | G307976 |
| TU364930 | lncRNA | downstream | 178850 | 14699997 ~ 14780758 (+) | True | G307997 |
| XR_003403804.2 | lncRNA | downstream | 239684 | 14760831 ~ 14763174 (+) | True | LOC113537908 |
| XM_026932749.2 | mRNA | upstream | 875 | 14495263 ~ 14513735 (+) | True | smarcd1 |
| XM_026932750.2 | mRNA | upstream | 875 | 14498544 ~ 14513735 (+) | False | smarcd1 |
| XM_026932690.2 | mRNA | upstream | 37793 | 14179783 ~ 14476817 (+) | True | asic1b |
| XM_034314332.1 | mRNA | upstream | 37793 | 14179783 ~ 14476817 (+) | False | asic1b |
| XM_034314333.1 | mRNA | upstream | 37793 | 14196323 ~ 14476817 (+) | False | asic1b |
| XM_026932523.2 | mRNA | downstream | 11563 | 14532710 ~ 14573427 (+) | True | cers5 |
| XM_026932527.2 | mRNA | downstream | 55187 | 14576334 ~ 14579348 (+) | True | LOC113537860 |
| XM_026932966.2 | mRNA | downstream | 78110 | 14599257 ~ 14610164 (+) | True | LOC113538112 |
| XM_026932967.2 | mRNA | downstream | 78136 | 14599283 ~ 14610164 (+) | False | LOC113538112 |
| XM_026932968.2 | mRNA | downstream | 78218 | 14599365 ~ 14610164 (+) | False | LOC113538112 |
| XR_004580240.1 | other | upstream | 38225 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU363207 | other | upstream | 2052074 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 2998797 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 3033510 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 3188250 | 11325604 ~ 11326360 (+) | True | G305869 |
| XR_004580181.1 | other | downstream | 1968214 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 1968214 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 2739832 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| TU367680 | other | downstream | 4166250 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | downstream | 4166306 | 18687453 ~ 18692014 (+) | False | snrpe |
