Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU364901 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G307971 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 14589025 ~ 14589232 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU364494 | lncRNA | upstream | 440580 | 14148141 ~ 14148445 (+) | True | G307588 |
| TU364114 | lncRNA | upstream | 492239 | 14096270 ~ 14096786 (+) | True | G307281 |
| TU364127 | lncRNA | upstream | 530823 | 14051835 ~ 14058202 (+) | True | G307293 |
| TU364094 | lncRNA | upstream | 572631 | 14015162 ~ 14016394 (+) | True | G307262 |
| TU364104 | lncRNA | upstream | 585194 | 14003608 ~ 14003831 (+) | True | G307272 |
| TU364909 | lncRNA | downstream | 9161 | 14598393 ~ 14598612 (+) | True | G307976 |
| TU364930 | lncRNA | downstream | 110765 | 14699997 ~ 14780758 (+) | True | G307997 |
| XR_003403804.2 | lncRNA | downstream | 171599 | 14760831 ~ 14763174 (+) | True | LOC113537908 |
| TU364954 | lncRNA | downstream | 209741 | 14798973 ~ 14800142 (+) | True | G308018 |
| XR_003403808.2 | lncRNA | downstream | 804377 | 15393609 ~ 15407641 (+) | True | LOC113537967 |
| XM_026932527.2 | mRNA | upstream | 9677 | 14576334 ~ 14579348 (+) | True | LOC113537860 |
| XM_026932523.2 | mRNA | upstream | 15598 | 14532710 ~ 14573427 (+) | True | cers5 |
| XM_026932839.2 | mRNA | upstream | 64049 | 14514592 ~ 14524976 (+) | True | gpd1b |
| XM_026932749.2 | mRNA | upstream | 75290 | 14495263 ~ 14513735 (+) | True | smarcd1 |
| XM_026932966.2 | mRNA | downstream | 10025 | 14599257 ~ 14610164 (+) | True | LOC113538112 |
| XM_026932967.2 | mRNA | downstream | 10051 | 14599283 ~ 14610164 (+) | False | LOC113538112 |
| XM_026932968.2 | mRNA | downstream | 10133 | 14599365 ~ 14610164 (+) | False | LOC113538112 |
| XM_026932763.2 | mRNA | downstream | 24531 | 14613763 ~ 14615894 (+) | True | ccdc51 |
| XM_026932898.2 | mRNA | downstream | 27756 | 14616988 ~ 14628607 (+) | True | mcm2 |
| TU364869 | other | upstream | 67878 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580240.1 | other | upstream | 112640 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU363207 | other | upstream | 2126489 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 3073212 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 3107925 | 11480669 ~ 11481100 (+) | True | G305955 |
| XR_004580181.1 | other | downstream | 1900129 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 1900129 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 2671747 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| TU367680 | other | downstream | 4098165 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | downstream | 4098221 | 18687453 ~ 18692014 (+) | False | snrpe |
