Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU365831 |
| length | 209 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G308822 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 16112799 ~ 16113007 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU365819 | lncRNA | upstream | 10958 | 16101612 ~ 16101841 (+) | True | G308810 |
| TU365808 | lncRNA | upstream | 22269 | 16090317 ~ 16090530 (+) | True | G308799 |
| TU365801 | lncRNA | upstream | 30896 | 16081675 ~ 16081903 (+) | True | G308792 |
| TU365774 | lncRNA | upstream | 74823 | 16037657 ~ 16037976 (+) | True | G308765 |
| TU365773 | lncRNA | upstream | 75167 | 16037416 ~ 16037632 (+) | True | G308764 |
| TU365836 | lncRNA | downstream | 6824 | 16119831 ~ 16120289 (+) | True | G308827 |
| TU365925 | lncRNA | downstream | 192789 | 16305796 ~ 16306003 (+) | True | G308915 |
| TU366076 | lncRNA | downstream | 482130 | 16595137 ~ 16595350 (+) | True | G309056 |
| TU366173 | lncRNA | downstream | 684124 | 16797131 ~ 16879737 (+) | False | G309135 |
| TU366175 | lncRNA | downstream | 684124 | 16797131 ~ 16882513 (+) | False | G309135 |
| XM_026932784.2 | mRNA | upstream | 235533 | 15863456 ~ 15877266 (+) | True | nicn1 |
| XM_026932807.2 | mRNA | upstream | 317372 | 15766022 ~ 15795427 (+) | True | dag1 |
| XM_026932810.2 | mRNA | upstream | 317372 | 15766651 ~ 15795427 (+) | False | dag1 |
| XM_026932808.2 | mRNA | upstream | 317372 | 15767749 ~ 15795427 (+) | False | dag1 |
| XM_026932439.2 | mRNA | upstream | 723671 | 15385294 ~ 15389128 (+) | True | rbm15b |
| XM_026933001.2 | mRNA | downstream | 376354 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XM_026933000.1 | mRNA | downstream | 376354 | 16489361 ~ 16492648 (+) | True | amigo3 |
| XM_026932620.2 | mRNA | downstream | 559813 | 16672820 ~ 16687543 (+) | True | ccdc66 |
| XM_026932622.2 | mRNA | downstream | 559813 | 16672820 ~ 16687543 (+) | False | ccdc66 |
| XM_026932444.2 | mRNA | downstream | 768995 | 16882002 ~ 16891308 (+) | True | atp6ap1la |
| TU364869 | other | upstream | 1591652 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580240.1 | other | upstream | 1636414 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU363207 | other | upstream | 3650263 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 4596986 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 4631699 | 11480669 ~ 11481100 (+) | True | G305955 |
| XR_004580181.1 | other | downstream | 376354 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 376354 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 1147972 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| TU367680 | other | downstream | 2574390 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | downstream | 2574446 | 18687453 ~ 18692014 (+) | False | snrpe |
