Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU367402 |
| length | 735 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G310201 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 18427425 ~ 18430590 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU367268 | lncRNA | upstream | 305170 | 18122030 ~ 18122255 (+) | True | G310084 |
| TU367138 | lncRNA | upstream | 369258 | 17964424 ~ 18058167 (+) | True | G309970 |
| TU367176 | lncRNA | upstream | 383911 | 18040882 ~ 18043514 (+) | False | G310007 |
| TU367179 | lncRNA | upstream | 383911 | 18040882 ~ 18043514 (+) | True | G310007 |
| TU367096 | lncRNA | upstream | 409329 | 17919536 ~ 18018096 (+) | True | G309933 |
| TU367413 | lncRNA | downstream | 13495 | 18444085 ~ 18445034 (+) | True | G310208 |
| TU367378 | lncRNA | downstream | 37213 | 18467803 ~ 18471024 (+) | True | G310183 |
| XR_003403812.2 | lncRNA | downstream | 165926 | 18596516 ~ 18601724 (+) | True | LOC113538055 |
| TU367657 | lncRNA | downstream | 171788 | 18602378 ~ 18602580 (+) | True | G310416 |
| TU367661 | lncRNA | downstream | 182925 | 18613515 ~ 18615654 (+) | True | G310420 |
| XM_026932965.2 | mRNA | upstream | 238 | 18420459 ~ 18427187 (+) | True | ghrh |
| XM_026932712.2 | mRNA | upstream | 17865 | 18403538 ~ 18409560 (+) | True | LOC113537956 |
| XM_026932713.2 | mRNA | upstream | 29353 | 18390505 ~ 18398072 (+) | True | LOC113537957 |
| XM_026932846.2 | mRNA | upstream | 309106 | 18102837 ~ 18118319 (+) | True | rap1ab |
| XM_034314421.1 | mRNA | upstream | 309106 | 18102842 ~ 18118319 (+) | False | rap1ab |
| XM_026932847.2 | mRNA | downstream | 23220 | 18453810 ~ 18454920 (+) | True | si:ch73-303b9.1 |
| XM_026932440.2 | mRNA | downstream | 46494 | 18477084 ~ 18540726 (+) | True | phactr3b |
| XM_026932441.2 | mRNA | downstream | 70682 | 18501272 ~ 18540726 (+) | False | phactr3b |
| XM_026932835.2 | mRNA | downstream | 122812 | 18553402 ~ 18558681 (+) | True | si:ch211-266k22.6 |
| XM_026932836.2 | mRNA | downstream | 122812 | 18553402 ~ 18558681 (+) | False | si:ch211-266k22.6 |
| TU366607 | other | upstream | 1163762 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| XR_004580181.1 | other | upstream | 1925741 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | upstream | 1933286 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU364869 | other | upstream | 3906278 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580240.1 | other | upstream | 3951040 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU367680 | other | downstream | 256807 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | downstream | 256863 | 18687453 ~ 18692014 (+) | False | snrpe |
| TU367971 | other | downstream | 656435 | 19087025 ~ 19087806 (+) | True | G310681 |
| TU368136 | other | downstream | 1077665 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU368156 | other | downstream | 1338400 | 19768990 ~ 19783913 (+) | False | vamp3 |
