Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU367971 |
| length | 782 |
| RNA type | TUCP |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G310681 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 19087025 ~ 19087806 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU367970 | lncRNA | upstream | 1518 | 19082369 ~ 19085507 (+) | True | G310680 |
| TU367966 | lncRNA | upstream | 4904 | 19081534 ~ 19082121 (+) | True | G310679 |
| TU367933 | lncRNA | upstream | 20539 | 19060335 ~ 19066486 (+) | True | G310649 |
| XR_004580273.1 | lncRNA | upstream | 122535 | 18914294 ~ 18964490 (+) | True | LOC117599928 |
| XR_004580274.1 | lncRNA | upstream | 127458 | 18914294 ~ 18959567 (+) | False | LOC117599928 |
| TU367980 | lncRNA | downstream | 2576 | 19090382 ~ 19122056 (+) | True | G310686 |
| TU367999 | lncRNA | downstream | 22323 | 19110129 ~ 19113027 (+) | False | G310703 |
| TU368000 | lncRNA | downstream | 22323 | 19110129 ~ 19113027 (+) | True | G310703 |
| TU368001 | lncRNA | downstream | 22323 | 19110129 ~ 19113027 (+) | False | G310703 |
| TU368005 | lncRNA | downstream | 22323 | 19110129 ~ 19113027 (+) | False | G310703 |
| XM_026932561.2 | mRNA | upstream | 27482 | 19042585 ~ 19059543 (+) | True | mfsd4aa |
| XM_026932563.2 | mRNA | upstream | 28223 | 19042582 ~ 19058802 (+) | False | mfsd4aa |
| XM_034314408.1 | mRNA | upstream | 49357 | 18972962 ~ 19037668 (+) | True | cdk18 |
| XM_034314409.1 | mRNA | upstream | 49357 | 18979997 ~ 19037668 (+) | False | cdk18 |
| XM_026932834.2 | mRNA | upstream | 283123 | 18790926 ~ 18803902 (+) | True | si:ch211-112f3.4 |
| XM_026932959.2 | mRNA | downstream | 250126 | 19337932 ~ 19343063 (+) | True | c20h1orf50 |
| XM_026932957.2 | mRNA | downstream | 261942 | 19349748 ~ 19363983 (+) | True | cdc42 |
| XM_026932958.2 | mRNA | downstream | 261942 | 19349748 ~ 19361222 (+) | False | cdc42 |
| XM_034313986.1 | mRNA | downstream | 262159 | 19349965 ~ 19363983 (+) | False | cdc42 |
| XM_026932871.2 | mRNA | downstream | 406952 | 19494758 ~ 19498061 (+) | False | svbp |
| TU367680 | other | upstream | 395011 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | upstream | 395011 | 18687453 ~ 18692014 (+) | False | snrpe |
| TU366607 | other | upstream | 1823362 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| XR_004580181.1 | other | upstream | 2585341 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | upstream | 2592886 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU368136 | other | downstream | 420449 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU368156 | other | downstream | 681184 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368157 | other | downstream | 681184 | 19768990 ~ 19783913 (+) | False | vamp3 |
| XR_004580241.1 | other | downstream | 1782846 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
