Item | Value |
---|---|
RNA id | TU368908 |
length | 404 |
lncRNA type | inter_gene |
GC content | 0.35 |
exon number | 2 |
gene id | G311488 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047614.1 |
NCBI id | CM018560.1 |
chromosome length | 21552800 |
location | 20903312 ~ 20937881 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU368906 | lncRNA | upstream | 18471 | 20882446 ~ 20884841 (+) | True | G311486 |
TU368910 | lncRNA | upstream | 49797 | 20807858 ~ 20853515 (+) | False | znf740a |
TU368909 | lncRNA | upstream | 59857 | 20842278 ~ 20843455 (+) | True | G311489 |
TU368938 | lncRNA | upstream | 98388 | 20767078 ~ 20804924 (+) | True | G311508 |
TU368929 | lncRNA | upstream | 120952 | 20781762 ~ 20782360 (+) | True | G311505 |
TU369035 | lncRNA | downstream | 10440 | 20948321 ~ 20951538 (+) | True | G311591 |
TU369043 | lncRNA | downstream | 29834 | 20967715 ~ 20968865 (+) | True | G311599 |
XR_003403815.2 | lncRNA | downstream | 68469 | 21006350 ~ 21012460 (+) | False | LOC113538073 |
XR_003403816.2 | lncRNA | downstream | 71887 | 21009768 ~ 21012460 (+) | True | LOC113538073 |
TU369109 | lncRNA | downstream | 212917 | 21150798 ~ 21155101 (+) | True | G311649 |
XM_026932826.2 | mRNA | upstream | 1901 | 20896980 ~ 20901411 (+) | True | smug1 |
XM_034314359.1 | mRNA | upstream | 1901 | 20899115 ~ 20901411 (+) | False | smug1 |
XM_034314334.1 | mRNA | upstream | 24905 | 20870652 ~ 20878407 (+) | True | hnrnpa1a |
XM_034314167.1 | mRNA | upstream | 42585 | 20831856 ~ 20860727 (+) | False | znf740a |
XM_034314335.1 | mRNA | downstream | 95242 | 21033123 ~ 21046577 (+) | True | calcoco1b |
XM_034314468.1 | mRNA | downstream | 175553 | 21113434 ~ 21135134 (+) | True | LOC113537842 |
XM_034314469.1 | mRNA | downstream | 175553 | 21113434 ~ 21135134 (+) | False | LOC113537842 |
XM_034314489.1 | mRNA | downstream | 199928 | 21137809 ~ 21149284 (+) | True | faim2b |
XM_034314304.1 | mRNA | downstream | 273371 | 21211252 ~ 21371670 (+) | True | lrp1aa |
XR_004580241.1 | other | upstream | 20947 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
TU368156 | other | upstream | 1119399 | 19768990 ~ 19783913 (+) | False | vamp3 |
TU368157 | other | upstream | 1119399 | 19768990 ~ 19783913 (+) | False | vamp3 |
TU368136 | other | upstream | 1386153 | 19508255 ~ 19517159 (+) | False | phf13 |
TU367971 | other | upstream | 1815506 | 19087025 ~ 19087806 (+) | True | G310681 |