Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU368909 |
| length | 759 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G311489 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 20842278 ~ 20843455 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU368938 | lncRNA | upstream | 37354 | 20767078 ~ 20804924 (+) | True | G311508 |
| TU368929 | lncRNA | upstream | 59918 | 20781762 ~ 20782360 (+) | True | G311505 |
| TU368924 | lncRNA | upstream | 72450 | 20767626 ~ 20769828 (+) | True | G311504 |
| TU368933 | lncRNA | upstream | 151538 | 20685167 ~ 20690740 (+) | True | G311506 |
| TU368936 | lncRNA | upstream | 157209 | 20682831 ~ 20685069 (+) | True | G311507 |
| TU368906 | lncRNA | downstream | 38991 | 20882446 ~ 20884841 (+) | True | G311486 |
| TU368908 | lncRNA | downstream | 59857 | 20903312 ~ 20937881 (+) | True | G311488 |
| TU368902 | lncRNA | downstream | 83548 | 20927003 ~ 20983511 (+) | True | G311482 |
| TU368903 | lncRNA | downstream | 89223 | 20932678 ~ 20943629 (+) | True | G311483 |
| TU369035 | lncRNA | downstream | 104866 | 20948321 ~ 20951538 (+) | True | G311591 |
| XM_026932838.2 | mRNA | upstream | 180589 | 20654185 ~ 20661689 (+) | True | slc2a10 |
| XM_026932837.2 | mRNA | upstream | 180589 | 20654185 ~ 20661689 (+) | False | slc2a10 |
| XM_026932903.2 | mRNA | upstream | 192105 | 20633750 ~ 20650173 (+) | True | si:ch73-267c23.10 |
| XM_026932496.2 | mRNA | upstream | 221039 | 20618291 ~ 20621239 (+) | True | LOC113537838 |
| XM_026932980.2 | mRNA | upstream | 239214 | 20596752 ~ 20603064 (+) | True | LOC113538122 |
| XM_034314334.1 | mRNA | downstream | 27197 | 20870652 ~ 20878407 (+) | True | hnrnpa1a |
| XM_026932826.2 | mRNA | downstream | 53525 | 20896980 ~ 20901411 (+) | True | smug1 |
| XM_034314359.1 | mRNA | downstream | 55660 | 20899115 ~ 20901411 (+) | False | smug1 |
| XM_034314335.1 | mRNA | downstream | 189668 | 21033123 ~ 21046577 (+) | True | calcoco1b |
| XM_034314468.1 | mRNA | downstream | 269979 | 21113434 ~ 21135134 (+) | True | LOC113537842 |
| TU368156 | other | upstream | 1058365 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368157 | other | upstream | 1058365 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368136 | other | upstream | 1325119 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU367971 | other | upstream | 1754472 | 19087025 ~ 19087806 (+) | True | G310681 |
| TU367679 | other | upstream | 2150264 | 18687453 ~ 18692014 (+) | False | snrpe |
| XR_004580241.1 | other | downstream | 27197 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
