Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU368929 |
| length | 515 |
| lncRNA type | inter_gene |
| GC content | 0.57 |
| exon number | 3 |
| gene id | G311505 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 20781762 ~ 20782360 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU368924 | lncRNA | upstream | 11934 | 20767626 ~ 20769828 (+) | True | G311504 |
| TU368933 | lncRNA | upstream | 91022 | 20685167 ~ 20690740 (+) | True | G311506 |
| TU368936 | lncRNA | upstream | 96693 | 20682831 ~ 20685069 (+) | True | G311507 |
| TU368955 | lncRNA | upstream | 113489 | 20666267 ~ 20668273 (+) | True | G311516 |
| TU368953 | lncRNA | upstream | 116017 | 20662768 ~ 20665745 (+) | True | G311515 |
| TU368910 | lncRNA | downstream | 25498 | 20807858 ~ 20853515 (+) | False | znf740a |
| TU368909 | lncRNA | downstream | 59918 | 20842278 ~ 20843455 (+) | True | G311489 |
| TU368906 | lncRNA | downstream | 100086 | 20882446 ~ 20884841 (+) | True | G311486 |
| TU368908 | lncRNA | downstream | 120952 | 20903312 ~ 20937881 (+) | True | G311488 |
| TU368902 | lncRNA | downstream | 144643 | 20927003 ~ 20983511 (+) | True | G311482 |
| XM_026932838.2 | mRNA | upstream | 120073 | 20654185 ~ 20661689 (+) | True | slc2a10 |
| XM_026932837.2 | mRNA | upstream | 120073 | 20654185 ~ 20661689 (+) | False | slc2a10 |
| XM_026932903.2 | mRNA | upstream | 131589 | 20633750 ~ 20650173 (+) | True | si:ch73-267c23.10 |
| XM_026932496.2 | mRNA | upstream | 160523 | 20618291 ~ 20621239 (+) | True | LOC113537838 |
| XM_026932980.2 | mRNA | upstream | 178698 | 20596752 ~ 20603064 (+) | True | LOC113538122 |
| XM_034314152.1 | mRNA | downstream | 49496 | 20831856 ~ 20860727 (+) | True | znf740a |
| XM_034314156.1 | mRNA | downstream | 49496 | 20831856 ~ 20860727 (+) | False | znf740a |
| XM_034314164.1 | mRNA | downstream | 49496 | 20831856 ~ 20860727 (+) | False | znf740a |
| XM_034314158.1 | mRNA | downstream | 49496 | 20831856 ~ 20860727 (+) | False | znf740a |
| XM_034314165.1 | mRNA | downstream | 49496 | 20831856 ~ 20860727 (+) | False | znf740a |
| TU368156 | other | upstream | 997849 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368157 | other | upstream | 997849 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368136 | other | upstream | 1264603 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU367971 | other | upstream | 1693956 | 19087025 ~ 19087806 (+) | True | G310681 |
| TU367679 | other | upstream | 2089748 | 18687453 ~ 18692014 (+) | False | snrpe |
| XR_004580241.1 | other | downstream | 88292 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
