Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU369128 |
| length | 462 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G311665 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 21191168 ~ 21191629 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU369118 | lncRNA | upstream | 6129 | 21166980 ~ 21185039 (+) | True | LOC117599907 |
| XR_004580235.1 | lncRNA | upstream | 6134 | 21167086 ~ 21185034 (+) | False | LOC117599907 |
| TU369113 | lncRNA | upstream | 26242 | 21159457 ~ 21164926 (+) | True | G311652 |
| TU369114 | lncRNA | upstream | 26242 | 21161473 ~ 21164926 (+) | False | G311652 |
| TU369116 | lncRNA | upstream | 27088 | 21161918 ~ 21164080 (+) | True | G311653 |
| TU369497 | lncRNA | downstream | 186231 | 21377860 ~ 21391093 (+) | True | G311946 |
| TU369523 | lncRNA | downstream | 292910 | 21484539 ~ 21484817 (+) | True | G311972 |
| TU369528 | lncRNA | downstream | 322842 | 21514471 ~ 21523897 (+) | True | G311977 |
| XM_034314489.1 | mRNA | upstream | 41884 | 21137809 ~ 21149284 (+) | True | faim2b |
| XM_034314468.1 | mRNA | upstream | 56034 | 21113434 ~ 21135134 (+) | True | LOC113537842 |
| XM_034314469.1 | mRNA | upstream | 56034 | 21113434 ~ 21135134 (+) | False | LOC113537842 |
| XM_034314335.1 | mRNA | upstream | 144591 | 21033123 ~ 21046577 (+) | True | calcoco1b |
| XM_034314359.1 | mRNA | upstream | 289757 | 20899115 ~ 20901411 (+) | False | smug1 |
| XM_034314304.1 | mRNA | downstream | 19623 | 21211252 ~ 21371670 (+) | True | lrp1aa |
| XM_034314441.1 | mRNA | downstream | 219147 | 21410776 ~ 21435824 (+) | False | alas1 |
| XM_034314442.1 | mRNA | downstream | 219147 | 21410776 ~ 21430388 (+) | False | alas1 |
| XM_026932745.2 | mRNA | downstream | 219147 | 21410776 ~ 21425183 (+) | True | alas1 |
| XM_034313987.1 | mRNA | downstream | 251670 | 21443299 ~ 21483333 (+) | True | poc1a |
| XR_004580241.1 | other | upstream | 308803 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
| TU368156 | other | upstream | 1407255 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368157 | other | upstream | 1407255 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368136 | other | upstream | 1674009 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU367971 | other | upstream | 2103362 | 19087025 ~ 19087806 (+) | True | G310681 |
