Item | Value |
---|---|
RNA id | XM_026932784.2 |
length | 955 |
RNA type | mRNA |
GC content | 0.47 |
exon number | 7 |
gene id | nicn1 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047614.1 |
NCBI id | CM018560.1 |
chromosome length | 21552800 |
location | 15863456 ~ 15877266 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | description |
---|---|
K16607 | NICN1; nicolin-1 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU365421 | lncRNA | upstream | 63566 | 15756890 ~ 15799890 (+) | False | dag1 |
TU365380 | lncRNA | upstream | 449634 | 15412099 ~ 15413822 (+) | True | G308404 |
XR_003403808.2 | lncRNA | upstream | 455815 | 15393609 ~ 15407641 (+) | True | LOC113537967 |
TU364954 | lncRNA | upstream | 1063314 | 14798973 ~ 14800142 (+) | True | G308018 |
TU364930 | lncRNA | upstream | 1082698 | 14699997 ~ 14780758 (+) | True | G307997 |
TU365743 | lncRNA | downstream | 116129 | 15993395 ~ 15994043 (+) | True | G308737 |
TU365764 | lncRNA | downstream | 143950 | 16021216 ~ 16022142 (+) | True | G308758 |
TU365769 | lncRNA | downstream | 150623 | 16027889 ~ 16028286 (+) | True | G308760 |
TU365773 | lncRNA | downstream | 160150 | 16037416 ~ 16037632 (+) | True | G308764 |
TU365774 | lncRNA | downstream | 160391 | 16037657 ~ 16037976 (+) | True | G308765 |
XM_026932807.2 | mRNA | upstream | 68029 | 15766022 ~ 15795427 (+) | True | dag1 |
XM_026932810.2 | mRNA | upstream | 68029 | 15766651 ~ 15795427 (+) | False | dag1 |
XM_026932808.2 | mRNA | upstream | 68029 | 15767749 ~ 15795427 (+) | False | dag1 |
XM_026932439.2 | mRNA | upstream | 474328 | 15385294 ~ 15389128 (+) | True | rbm15b |
XM_026932414.2 | mRNA | upstream | 480508 | 15375847 ~ 15382948 (+) | True | manf |
XM_026933001.2 | mRNA | downstream | 612095 | 16489361 ~ 16501684 (+) | False | amigo3 |
XM_026933000.1 | mRNA | downstream | 612095 | 16489361 ~ 16492648 (+) | True | amigo3 |
XM_026932620.2 | mRNA | downstream | 795554 | 16672820 ~ 16687543 (+) | True | ccdc66 |
XM_026932622.2 | mRNA | downstream | 795554 | 16672820 ~ 16687543 (+) | False | ccdc66 |
XM_026932444.2 | mRNA | downstream | 1004736 | 16882002 ~ 16891308 (+) | True | atp6ap1la |
TU364869 | other | upstream | 1342309 | 14514610 ~ 14521147 (+) | False | gpd1b |
XR_004580240.1 | other | upstream | 1387071 | 14370788 ~ 14476385 (+) | False | asic1b |
TU363207 | other | upstream | 3400920 | 12457601 ~ 12462536 (+) | True | G306480 |
TU362774 | other | upstream | 4347643 | 11515059 ~ 11515813 (+) | True | G306103 |
TU362623 | other | upstream | 4382356 | 11480669 ~ 11481100 (+) | True | G305955 |
XR_004580181.1 | other | downstream | 612095 | 16489361 ~ 16501684 (+) | False | amigo3 |
XR_004580182.1 | other | downstream | 612095 | 16489361 ~ 16494139 (+) | False | amigo3 |
TU366607 | other | downstream | 1383713 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
TU367680 | other | downstream | 2810131 | 18687397 ~ 18692014 (+) | True | snrpe |
TU367679 | other | downstream | 2810187 | 18687453 ~ 18692014 (+) | False | snrpe |