Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026932887.2 |
| length | 883 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 2 |
| gene id | her15.2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 17169010 ~ 17170004 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K06055 | HES5; hairy and enhancer of split 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU366262 | lncRNA | upstream | 152766 | 17015636 ~ 17016244 (+) | True | G309208 |
| TU366233 | lncRNA | upstream | 168986 | 16903181 ~ 17000024 (+) | True | G309184 |
| TU366466 | lncRNA | downstream | 2258 | 17172262 ~ 17184538 (+) | True | G309389 |
| TU366592 | lncRNA | downstream | 74696 | 17244700 ~ 17248075 (+) | True | G309461 |
| TU366593 | lncRNA | downstream | 74696 | 17244700 ~ 17248075 (+) | False | G309461 |
| XR_004580174.1 | lncRNA | downstream | 106436 | 17276440 ~ 17277568 (+) | False | LOC117599872 |
| TU366620 | lncRNA | downstream | 106452 | 17276456 ~ 17277832 (+) | True | LOC117599872 |
| XM_034314375.1 | mRNA | upstream | 4402 | 17163772 ~ 17164608 (+) | True | LOC113537832 |
| XM_026932849.2 | mRNA | upstream | 33896 | 17133887 ~ 17135114 (+) | True | LOC113538038 |
| XM_026932559.2 | mRNA | upstream | 53849 | 17111543 ~ 17115161 (+) | True | LOC113537879 |
| XM_026932873.2 | mRNA | upstream | 61094 | 17105866 ~ 17107916 (+) | True | LOC113538050 |
| XM_034314379.1 | mRNA | upstream | 61094 | 17105907 ~ 17107916 (+) | False | LOC113538050 |
| XM_026932910.2 | mRNA | downstream | 9618 | 17179622 ~ 17180679 (+) | True | LOC113538082 |
| XM_026932533.1 | mRNA | downstream | 90975 | 17260979 ~ 17263459 (+) | False | LOC113537865 |
| XM_026932831.2 | mRNA | downstream | 127716 | 17297720 ~ 17318657 (+) | True | lrrc38b |
| XM_026932674.2 | mRNA | downstream | 206955 | 17376959 ~ 17380928 (+) | True | aadacl4 |
| XM_026932884.2 | mRNA | downstream | 210995 | 17380999 ~ 17387719 (+) | True | c20h1orf158 |
| XR_004580181.1 | other | upstream | 667326 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | upstream | 674871 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU364869 | other | upstream | 2647863 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580240.1 | other | upstream | 2692625 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU363207 | other | upstream | 4706474 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU366607 | other | downstream | 90975 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
| TU367680 | other | downstream | 1517393 | 18687397 ~ 18692014 (+) | True | snrpe |
| TU367679 | other | downstream | 1517449 | 18687453 ~ 18692014 (+) | False | snrpe |
| TU367971 | other | downstream | 1917021 | 19087025 ~ 19087806 (+) | True | G310681 |
| TU368136 | other | downstream | 2338251 | 19508255 ~ 19517159 (+) | False | phf13 |
