Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034314284.1 |
| length | 756 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 9 |
| gene id | LOC113539544 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 6067054 ~ 6071054 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU358684 | lncRNA | upstream | 486075 | 5577633 ~ 5580979 (+) | True | G302585 |
| TU358674 | lncRNA | upstream | 502040 | 5522534 ~ 5565014 (+) | True | G302575 |
| TU358685 | lncRNA | upstream | 505530 | 5560613 ~ 5561524 (+) | True | G302586 |
| TU358652 | lncRNA | upstream | 595562 | 5427207 ~ 5471492 (+) | False | ptprga |
| TU358624 | lncRNA | upstream | 849629 | 5175570 ~ 5217425 (+) | True | G302530 |
| TU359310 | lncRNA | downstream | 129969 | 6200446 ~ 6293749 (+) | True | LOC113539422 |
| TU359311 | lncRNA | downstream | 129969 | 6200446 ~ 6293749 (+) | False | LOC113539422 |
| TU359315 | lncRNA | downstream | 279715 | 6350192 ~ 6351096 (+) | True | G303181 |
| TU359549 | lncRNA | downstream | 427607 | 6498084 ~ 6502636 (+) | True | tmem167b |
| TU359550 | lncRNA | downstream | 427607 | 6498084 ~ 6502324 (+) | False | tmem167b |
| XM_026935414.2 | mRNA | upstream | 468815 | 5582516 ~ 5598239 (+) | True | taf4a |
| XM_026935415.2 | mRNA | upstream | 468815 | 5582516 ~ 5598239 (+) | False | taf4a |
| XM_026935416.2 | mRNA | upstream | 489458 | 5557568 ~ 5577596 (+) | True | si:ch211-253b8.5 |
| XM_026935341.2 | mRNA | upstream | 523030 | 5520122 ~ 5544024 (+) | True | bmp7a |
| XM_026935210.2 | mRNA | upstream | 549634 | 5515520 ~ 5517420 (+) | False | LOC113539468 |
| XM_034314279.1 | mRNA | downstream | 3081 | 6073558 ~ 6079806 (+) | True | LOC113539542 |
| XM_034314280.1 | mRNA | downstream | 13963 | 6084440 ~ 6090037 (+) | True | LOC113539543 |
| XM_026935350.2 | mRNA | downstream | 28533 | 6099010 ~ 6104059 (+) | True | LOC113539546 |
| XM_026935235.2 | mRNA | downstream | 90313 | 6160790 ~ 6198383 (+) | True | ncoa3 |
| XM_026935160.2 | mRNA | downstream | 215771 | 6286248 ~ 6293058 (+) | False | LOC113539422 |
| TU358141 | other | upstream | 1597880 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 4568567 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 4569427 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 5202166 | 863338 ~ 864888 (+) | False | fbxo42 |
| TU355161 | other | upstream | 5222243 | 842980 ~ 844811 (+) | False | LOC113539702 |
| XR_003403967.2 | other | downstream | 593597 | 6664074 ~ 6779358 (+) | False | cpne5b |
| XR_004580199.1 | other | downstream | 2431161 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 2431161 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 4442194 | 10512671 ~ 10513270 (+) | True | G305515 |
| XR_004580251.1 | other | downstream | 4693797 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
