Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026935652.2 |
| length | 1016 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | fam72a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 7213709 ~ 7218371 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU360102 | lncRNA | upstream | 108208 | 7101770 ~ 7105529 (+) | True | G303806 |
| TU360012 | lncRNA | upstream | 212625 | 6994845 ~ 7001112 (+) | True | LOC113539683 |
| XR_003403952.2 | lncRNA | upstream | 212656 | 6996073 ~ 7001081 (+) | False | LOC113539683 |
| TU359932 | lncRNA | upstream | 313207 | 6898490 ~ 6900530 (+) | True | G303658 |
| TU359917 | lncRNA | upstream | 342965 | 6867718 ~ 6870772 (+) | True | G303645 |
| TU360205 | lncRNA | downstream | 197044 | 7415415 ~ 7420578 (+) | True | G303889 |
| TU360207 | lncRNA | downstream | 202335 | 7420706 ~ 7446186 (+) | True | G303891 |
| TU360208 | lncRNA | downstream | 219084 | 7437455 ~ 7448739 (+) | True | G303892 |
| TU360300 | lncRNA | downstream | 485845 | 7704216 ~ 7705243 (+) | True | G303966 |
| TU360545 | lncRNA | downstream | 684984 | 7903355 ~ 7903564 (+) | True | G304193 |
| XM_026935649.2 | mRNA | upstream | 260950 | 6949935 ~ 6952787 (+) | True | il10 |
| XM_026935650.2 | mRNA | upstream | 272973 | 6938018 ~ 6940764 (+) | True | il19l |
| XM_034314084.1 | mRNA | upstream | 280586 | 6925266 ~ 6933151 (+) | False | prelp |
| XM_026935646.2 | mRNA | upstream | 280586 | 6928044 ~ 6933151 (+) | True | prelp |
| XM_026935647.2 | mRNA | upstream | 295752 | 6913250 ~ 6917985 (+) | True | zgc:113307 |
| XM_034314287.1 | mRNA | downstream | 190464 | 7408835 ~ 7541196 (+) | True | foxp4 |
| XM_034314289.1 | mRNA | downstream | 190464 | 7408835 ~ 7541196 (+) | False | foxp4 |
| XM_034314288.1 | mRNA | downstream | 229482 | 7447853 ~ 7541196 (+) | False | foxp4 |
| XM_034314028.1 | mRNA | downstream | 331415 | 7549786 ~ 7593458 (+) | True | mdfi |
| XM_026935267.2 | mRNA | downstream | 331509 | 7549880 ~ 7593458 (+) | False | mdfi |
| XR_003403967.2 | other | upstream | 434379 | 6664074 ~ 6779358 (+) | False | cpne5b |
| TU358141 | other | upstream | 2744563 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 5715250 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 5716110 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 6348849 | 863338 ~ 864888 (+) | False | fbxo42 |
| XR_004580199.1 | other | downstream | 1283267 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 1283267 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 3294300 | 10512671 ~ 10513270 (+) | True | G305515 |
| XR_004580251.1 | other | downstream | 3545903 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | downstream | 3550336 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
