Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026935714.2 |
| length | 1204 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 4 |
| gene id | rabif |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 9407525 ~ 9409888 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0043087 | regulation of GTPase activity | biological_process |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| id | description |
|---|---|
| K19952 | RABIF, MSS4, DSS4; guanine nucleotide exchange factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU361387 | lncRNA | upstream | 3258 | 9404051 ~ 9404267 (+) | True | G304926 |
| TU361385 | lncRNA | upstream | 11599 | 9395575 ~ 9395926 (+) | True | G304924 |
| TU361378 | lncRNA | upstream | 41692 | 9360330 ~ 9365833 (+) | True | G304917 |
| XR_003403966.2 | lncRNA | upstream | 94734 | 9311720 ~ 9312791 (+) | True | LOC113539732 |
| TU361352 | lncRNA | upstream | 109947 | 9297369 ~ 9297578 (+) | True | G304898 |
| TU361388 | lncRNA | downstream | 16155 | 9426043 ~ 9427519 (+) | True | G304927 |
| TU361416 | lncRNA | downstream | 126412 | 9536300 ~ 9551524 (+) | False | shisa4 |
| TU361417 | lncRNA | downstream | 135341 | 9545229 ~ 9551761 (+) | True | shisa4 |
| TU361423 | lncRNA | downstream | 151497 | 9561385 ~ 9561606 (+) | True | G304947 |
| TU361425 | lncRNA | downstream | 165534 | 9575422 ~ 9576781 (+) | True | G304949 |
| XM_026935410.2 | mRNA | upstream | 27540 | 9358819 ~ 9379985 (+) | True | LOC113539578 |
| XM_034314301.1 | mRNA | upstream | 27540 | 9358819 ~ 9379985 (+) | False | LOC113539578 |
| XM_034314482.1 | mRNA | upstream | 56632 | 9347088 ~ 9350893 (+) | True | rnpep |
| XM_026935590.2 | mRNA | upstream | 72146 | 9316399 ~ 9335379 (+) | False | inavab |
| XM_026935711.2 | mRNA | downstream | 364 | 9410252 ~ 9435881 (+) | False | kdm5ba |
| XM_034314004.1 | mRNA | downstream | 364 | 9410252 ~ 9435881 (+) | False | kdm5ba |
| XM_034314003.1 | mRNA | downstream | 748 | 9410636 ~ 9435881 (+) | True | kdm5ba |
| XM_026935713.2 | mRNA | downstream | 1542 | 9411430 ~ 9435881 (+) | False | kdm5ba |
| XM_026935241.2 | mRNA | downstream | 27345 | 9437233 ~ 9488029 (+) | True | ipo9 |
| XR_004580199.1 | other | upstream | 848614 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | upstream | 848737 | 8501638 ~ 8558788 (+) | False | nfasca |
| XR_003403967.2 | other | upstream | 2628167 | 6664074 ~ 6779358 (+) | False | cpne5b |
| TU358141 | other | upstream | 4938351 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 7909038 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU362120 | other | downstream | 1102783 | 10512671 ~ 10513270 (+) | True | G305515 |
| XR_004580251.1 | other | downstream | 1354386 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | downstream | 1358819 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| XR_004580252.1 | other | downstream | 1358819 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| TU362376 | other | downstream | 1701851 | 11111739 ~ 11112518 (+) | True | G305727 |
