Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU371707 |
| length | 209 |
| lncRNA type | intronic |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G313796 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 3299098 ~ 3299306 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU371493 | lncRNA | upstream | 222728 | 3076049 ~ 3076370 (+) | True | G313607 |
| XR_003404407.2 | lncRNA | upstream | 353891 | 2942487 ~ 2945207 (+) | True | LOC113543325 |
| TU371354 | lncRNA | upstream | 509602 | 2789242 ~ 2789496 (+) | True | G313494 |
| XR_004580285.1 | lncRNA | upstream | 562510 | 2731215 ~ 2736588 (+) | True | LOC117599939 |
| TU371318 | lncRNA | upstream | 563714 | 2735119 ~ 2735384 (+) | True | G313465 |
| TU371743 | lncRNA | downstream | 181794 | 3481100 ~ 3489299 (+) | False | LOC113543208 |
| TU371775 | lncRNA | downstream | 225003 | 3524309 ~ 3524518 (+) | True | G313853 |
| TU371896 | lncRNA | downstream | 473764 | 3773070 ~ 3819909 (+) | True | G313949 |
| TU371923 | lncRNA | downstream | 507842 | 3807148 ~ 3808690 (+) | True | G313975 |
| TU371944 | lncRNA | downstream | 546551 | 3845857 ~ 3846095 (+) | True | G313990 |
| XM_026941475.2 | mRNA | upstream | 216347 | 3080016 ~ 3082751 (+) | True | nrn1b |
| XM_026940953.2 | mRNA | upstream | 279635 | 3014486 ~ 3019463 (+) | True | nebl |
| XM_026940823.2 | mRNA | upstream | 313796 | 2975646 ~ 2985302 (+) | True | bmi1b |
| XM_026940933.2 | mRNA | upstream | 420383 | 2872529 ~ 2878715 (+) | True | klhl40a |
| XM_026941250.2 | mRNA | upstream | 427842 | 2860285 ~ 2871256 (+) | True | hhatla |
| XM_026941285.2 | mRNA | downstream | 124261 | 3423567 ~ 3489367 (+) | False | LOC113543208 |
| XM_026941286.2 | mRNA | downstream | 127499 | 3426805 ~ 3489367 (+) | True | LOC113543208 |
| XM_026941367.2 | mRNA | downstream | 202761 | 3502067 ~ 3523213 (+) | True | atg5 |
| XM_034314852.1 | mRNA | downstream | 343009 | 3642315 ~ 3646672 (+) | True | LOC113543357 |
| XM_026941244.2 | mRNA | downstream | 348441 | 3647747 ~ 3662687 (+) | True | nt5c3a |
| trnat-agu_12 | other | upstream | 409710 | 2889315 ~ 2889388 (+) | True | trnat-agu_12 |
| TU371295 | other | upstream | 623250 | 2675281 ~ 2675848 (+) | True | G313445 |
| TU371294 | other | upstream | 623250 | 2675322 ~ 2675848 (+) | False | G313445 |
| XR_004580352.1 | other | upstream | 637677 | 2655200 ~ 2661421 (+) | False | LOC117599997 |
| trnas-aga_13 | other | downstream | 326110 | 3625416 ~ 3625497 (+) | True | trnas-aga_13 |
| trnas-aga_14 | other | downstream | 326654 | 3625960 ~ 3626030 (+) | True | trnas-aga_14 |
| trnas-aga_16 | other | downstream | 328726 | 3628032 ~ 3628113 (+) | True | trnas-aga_16 |
| trnap-ugg_21 | other | downstream | 647629 | 3946935 ~ 3947006 (+) | True | trnap-ugg_21 |
| XR_004580320.1 | other | downstream | 1293134 | 4592440 ~ 4692816 (+) | False | LOC113543063 |
