Item | Value |
---|---|
RNA id | TU373751 |
length | 1199 |
lncRNA type | inter_gene |
GC content | 0.46 |
exon number | 1 |
gene id | G315591 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047615.1 |
NCBI id | CM018561.1 |
chromosome length | 21248730 |
location | 6251434 ~ 6252669 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU373739 | lncRNA | upstream | 17208 | 6232601 ~ 6234263 (+) | True | G315583 |
TU373740 | lncRNA | upstream | 19892 | 6230576 ~ 6231579 (+) | True | G315584 |
TU373736 | lncRNA | upstream | 24801 | 6225971 ~ 6226670 (+) | True | G315580 |
TU373735 | lncRNA | upstream | 25704 | 6224759 ~ 6225767 (+) | True | G315579 |
TU373594 | lncRNA | upstream | 73418 | 6177454 ~ 6178053 (+) | True | G315454 |
TU373835 | lncRNA | downstream | 147071 | 6399740 ~ 6399979 (+) | True | G315647 |
TU373836 | lncRNA | downstream | 150733 | 6403402 ~ 6403601 (+) | True | G315648 |
TU373838 | lncRNA | downstream | 153453 | 6406122 ~ 6407755 (+) | True | G315650 |
TU373863 | lncRNA | downstream | 223020 | 6475689 ~ 6475893 (+) | True | G315665 |
TU373858 | lncRNA | downstream | 253271 | 6505940 ~ 6506686 (+) | True | G315660 |
XM_026941443.2 | mRNA | upstream | 27057 | 6217438 ~ 6224414 (+) | True | sbds |
XM_026940946.2 | mRNA | upstream | 104381 | 6140585 ~ 6147090 (+) | True | LOC113543022 |
XM_026941237.2 | mRNA | upstream | 113070 | 6124611 ~ 6138401 (+) | True | cul3b |
XM_026941484.2 | mRNA | upstream | 143102 | 6106002 ~ 6108369 (+) | True | LOC113543361 |
XM_026940984.2 | mRNA | upstream | 155009 | 6042800 ~ 6096462 (+) | False | dock10 |
XM_026940835.2 | mRNA | downstream | 10959 | 6263628 ~ 6266410 (+) | True | LOC113542971 |
XM_026941336.2 | mRNA | downstream | 13824 | 6266493 ~ 6267874 (+) | True | LOC113543241 |
XM_034314542.1 | mRNA | downstream | 22070 | 6274739 ~ 6276110 (+) | True | LOC113543329 |
XM_026941079.2 | mRNA | downstream | 131341 | 6384010 ~ 6399285 (+) | True | LOC113543080 |
XM_034314660.1 | mRNA | downstream | 131356 | 6384025 ~ 6399285 (+) | False | LOC113543080 |
TU373737 | other | upstream | 24231 | 6226717 ~ 6227240 (+) | True | G315581 |
TU373444 | other | upstream | 354641 | 5894504 ~ 5896830 (+) | False | shox2 |
trnat-agu_13 | other | upstream | 1031853 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
TU372849 | other | upstream | 1160374 | 5088101 ~ 5091097 (+) | False | sptssb |
TU372696 | other | upstream | 1293351 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
XR_004580329.1 | other | downstream | 684671 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
TU374286 | other | downstream | 880790 | 7133459 ~ 7135501 (+) | True | G316001 |
TU374748 | other | downstream | 1442865 | 7695534 ~ 7695919 (+) | True | G316413 |
TU375134 | other | downstream | 2010670 | 8263339 ~ 8264061 (+) | True | G316744 |
TU375135 | other | downstream | 2016040 | 8268709 ~ 8269198 (+) | True | G316745 |