Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU373835 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G315647 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 6399740 ~ 6399979 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU373749 | lncRNA | upstream | 147071 | 6251434 ~ 6252669 (+) | True | G315591 |
| TU373751 | lncRNA | upstream | 147071 | 6251471 ~ 6252669 (+) | False | G315591 |
| TU373750 | lncRNA | upstream | 147118 | 6251434 ~ 6252622 (+) | False | G315591 |
| TU373748 | lncRNA | upstream | 147118 | 6251471 ~ 6252622 (+) | False | G315591 |
| TU373739 | lncRNA | upstream | 165477 | 6232601 ~ 6234263 (+) | True | G315583 |
| TU373836 | lncRNA | downstream | 3423 | 6403402 ~ 6403601 (+) | True | G315648 |
| TU373838 | lncRNA | downstream | 6143 | 6406122 ~ 6407755 (+) | True | G315650 |
| TU373863 | lncRNA | downstream | 75710 | 6475689 ~ 6475893 (+) | True | G315665 |
| TU373858 | lncRNA | downstream | 105961 | 6505940 ~ 6506686 (+) | True | G315660 |
| TU374042 | lncRNA | downstream | 246166 | 6646145 ~ 6654063 (+) | True | G315811 |
| XM_026941079.2 | mRNA | upstream | 455 | 6384010 ~ 6399285 (+) | True | LOC113543080 |
| XM_034314660.1 | mRNA | upstream | 455 | 6384025 ~ 6399285 (+) | False | LOC113543080 |
| XM_034314662.1 | mRNA | upstream | 455 | 6384026 ~ 6399285 (+) | False | LOC113543080 |
| XM_026941081.2 | mRNA | upstream | 455 | 6384200 ~ 6399285 (+) | False | LOC113543080 |
| XM_026941078.2 | mRNA | upstream | 455 | 6384200 ~ 6399285 (+) | False | LOC113543080 |
| XM_026941090.2 | mRNA | downstream | 34287 | 6434266 ~ 6470111 (+) | True | LOC113543083 |
| XM_026941279.2 | mRNA | downstream | 496267 | 6896246 ~ 6904082 (+) | True | LOC113543204 |
| XM_034314796.1 | mRNA | downstream | 537361 | 6937340 ~ 6942819 (+) | False | LOC113543138 |
| XM_034314797.1 | mRNA | downstream | 537363 | 6937342 ~ 6942819 (+) | True | LOC113543138 |
| XM_026941194.2 | mRNA | downstream | 537364 | 6937343 ~ 6944990 (+) | False | LOC113543138 |
| TU373737 | other | upstream | 172500 | 6226717 ~ 6227240 (+) | True | G315581 |
| TU373444 | other | upstream | 502910 | 5894504 ~ 5896830 (+) | False | shox2 |
| trnat-agu_13 | other | upstream | 1180122 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
| TU372849 | other | upstream | 1308643 | 5088101 ~ 5091097 (+) | False | sptssb |
| TU372696 | other | upstream | 1441620 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| XR_004580329.1 | other | downstream | 537361 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU374286 | other | downstream | 733480 | 7133459 ~ 7135501 (+) | True | G316001 |
| TU374748 | other | downstream | 1295555 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU375134 | other | downstream | 1863360 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU375135 | other | downstream | 1868730 | 8268709 ~ 8269198 (+) | True | G316745 |
