Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU374135 |
| length | 281 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G315886 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 6894337 ~ 6894617 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU374111 | lncRNA | upstream | 167649 | 6726474 ~ 6726688 (+) | True | G315862 |
| TU374042 | lncRNA | upstream | 240274 | 6646145 ~ 6654063 (+) | True | G315811 |
| TU373858 | lncRNA | upstream | 387651 | 6505940 ~ 6506686 (+) | True | G315660 |
| TU373863 | lncRNA | upstream | 418444 | 6475689 ~ 6475893 (+) | True | G315665 |
| TU373838 | lncRNA | upstream | 486582 | 6406122 ~ 6407755 (+) | True | G315650 |
| TU374147 | lncRNA | downstream | 19644 | 6914261 ~ 6915541 (+) | True | G315894 |
| TU374158 | lncRNA | downstream | 40332 | 6934949 ~ 6935177 (+) | True | G315901 |
| TU374244 | lncRNA | downstream | 138948 | 7033565 ~ 7033806 (+) | True | G315968 |
| TU374285 | lncRNA | downstream | 233074 | 7127691 ~ 7129877 (+) | True | G316000 |
| TU374593 | lncRNA | downstream | 531844 | 7426461 ~ 7433424 (+) | True | G316288 |
| XM_026941090.2 | mRNA | upstream | 424226 | 6434266 ~ 6470111 (+) | True | LOC113543083 |
| XM_026941081.2 | mRNA | upstream | 495052 | 6384200 ~ 6399285 (+) | False | LOC113543080 |
| XM_026941279.2 | mRNA | downstream | 1629 | 6896246 ~ 6904082 (+) | True | LOC113543204 |
| XM_034314796.1 | mRNA | downstream | 42723 | 6937340 ~ 6942819 (+) | False | LOC113543138 |
| XM_034314797.1 | mRNA | downstream | 42725 | 6937342 ~ 6942819 (+) | True | LOC113543138 |
| XM_026941194.2 | mRNA | downstream | 42726 | 6937343 ~ 6944990 (+) | False | LOC113543138 |
| XM_034314795.1 | mRNA | downstream | 42965 | 6937582 ~ 6944990 (+) | False | LOC113543138 |
| TU373737 | other | upstream | 667097 | 6226717 ~ 6227240 (+) | True | G315581 |
| TU373444 | other | upstream | 997507 | 5894504 ~ 5896830 (+) | False | shox2 |
| trnat-agu_13 | other | upstream | 1674719 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
| TU372849 | other | upstream | 1803240 | 5088101 ~ 5091097 (+) | False | sptssb |
| TU372696 | other | upstream | 1936217 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| XR_004580329.1 | other | downstream | 42723 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU374286 | other | downstream | 238842 | 7133459 ~ 7135501 (+) | True | G316001 |
| TU374748 | other | downstream | 800917 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU375134 | other | downstream | 1368722 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU375135 | other | downstream | 1374092 | 8268709 ~ 8269198 (+) | True | G316745 |
