Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU374158 |
| length | 229 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G315901 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 6934949 ~ 6935177 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU374147 | lncRNA | upstream | 19408 | 6914261 ~ 6915541 (+) | True | G315894 |
| TU374135 | lncRNA | upstream | 40332 | 6894337 ~ 6894617 (+) | True | G315886 |
| TU374111 | lncRNA | upstream | 208261 | 6726474 ~ 6726688 (+) | True | G315862 |
| TU374042 | lncRNA | upstream | 280886 | 6646145 ~ 6654063 (+) | True | G315811 |
| TU373858 | lncRNA | upstream | 428263 | 6505940 ~ 6506686 (+) | True | G315660 |
| TU374244 | lncRNA | downstream | 98388 | 7033565 ~ 7033806 (+) | True | G315968 |
| TU374285 | lncRNA | downstream | 192514 | 7127691 ~ 7129877 (+) | True | G316000 |
| TU374593 | lncRNA | downstream | 491284 | 7426461 ~ 7433424 (+) | True | G316288 |
| TU374628 | lncRNA | downstream | 569902 | 7505079 ~ 7505404 (+) | True | G316317 |
| TU374657 | lncRNA | downstream | 629909 | 7565086 ~ 7568068 (+) | True | G316339 |
| XM_026941279.2 | mRNA | upstream | 30867 | 6896246 ~ 6904082 (+) | True | LOC113543204 |
| XM_026941090.2 | mRNA | upstream | 464838 | 6434266 ~ 6470111 (+) | True | LOC113543083 |
| XM_026941078.2 | mRNA | upstream | 535664 | 6384200 ~ 6399285 (+) | False | LOC113543080 |
| XM_034314796.1 | mRNA | downstream | 2163 | 6937340 ~ 6942819 (+) | False | LOC113543138 |
| XM_034314797.1 | mRNA | downstream | 2165 | 6937342 ~ 6942819 (+) | True | LOC113543138 |
| XM_026941194.2 | mRNA | downstream | 2166 | 6937343 ~ 6944990 (+) | False | LOC113543138 |
| XM_034314795.1 | mRNA | downstream | 2405 | 6937582 ~ 6944990 (+) | False | LOC113543138 |
| XM_026941228.2 | mRNA | downstream | 10349 | 6945526 ~ 6958889 (+) | True | hnrnpl2 |
| TU373737 | other | upstream | 707709 | 6226717 ~ 6227240 (+) | True | G315581 |
| TU373444 | other | upstream | 1038119 | 5894504 ~ 5896830 (+) | False | shox2 |
| trnat-agu_13 | other | upstream | 1715331 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
| TU372849 | other | upstream | 1843852 | 5088101 ~ 5091097 (+) | False | sptssb |
| TU372696 | other | upstream | 1976829 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| XR_004580329.1 | other | downstream | 2163 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU374286 | other | downstream | 198282 | 7133459 ~ 7135501 (+) | True | G316001 |
| TU374748 | other | downstream | 760357 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU375134 | other | downstream | 1328162 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU375135 | other | downstream | 1333532 | 8268709 ~ 8269198 (+) | True | G316745 |
