Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU374593 |
| length | 480 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 5 |
| gene id | G316288 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 7426461 ~ 7433424 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU374285 | lncRNA | upstream | 296584 | 7127691 ~ 7129877 (+) | True | G316000 |
| TU374244 | lncRNA | upstream | 392655 | 7033565 ~ 7033806 (+) | True | G315968 |
| TU374158 | lncRNA | upstream | 491284 | 6934949 ~ 6935177 (+) | True | G315901 |
| TU374147 | lncRNA | upstream | 510920 | 6914261 ~ 6915541 (+) | True | G315894 |
| TU374135 | lncRNA | upstream | 531844 | 6894337 ~ 6894617 (+) | True | G315886 |
| TU374628 | lncRNA | downstream | 71655 | 7505079 ~ 7505404 (+) | True | G316317 |
| TU374657 | lncRNA | downstream | 131662 | 7565086 ~ 7568068 (+) | True | G316339 |
| TU374659 | lncRNA | downstream | 131662 | 7565086 ~ 7568068 (+) | False | G316339 |
| TU374677 | lncRNA | downstream | 148908 | 7582332 ~ 7590920 (+) | False | crsp7 |
| XR_004580345.1 | lncRNA | downstream | 215280 | 7648704 ~ 7650020 (+) | True | LOC117599993 |
| XM_026941410.2 | mRNA | upstream | 31997 | 7259286 ~ 7394464 (+) | True | dscamb |
| XM_034297691.1 | mRNA | upstream | 71443 | 7259272 ~ 7355018 (+) | False | dscamb |
| XM_034314802.1 | mRNA | upstream | 223261 | 7145403 ~ 7203200 (+) | True | atm |
| XM_034314803.1 | mRNA | upstream | 223261 | 7155710 ~ 7203200 (+) | False | atm |
| XM_034314805.1 | mRNA | upstream | 270232 | 7145401 ~ 7156229 (+) | False | atm |
| XM_034314700.1 | mRNA | downstream | 8680 | 7442104 ~ 7453708 (+) | True | LOC113543091 |
| XM_034314701.1 | mRNA | downstream | 8680 | 7442104 ~ 7453708 (+) | False | LOC113543091 |
| XM_034314702.1 | mRNA | downstream | 8680 | 7442104 ~ 7453708 (+) | False | LOC113543091 |
| XM_034314703.1 | mRNA | downstream | 8680 | 7442104 ~ 7453708 (+) | False | LOC113543091 |
| XM_034314651.1 | mRNA | downstream | 33209 | 7466633 ~ 7490001 (+) | False | brwd1 |
| TU374286 | other | upstream | 290960 | 7133459 ~ 7135501 (+) | True | G316001 |
| XR_004580329.1 | other | upstream | 481853 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU373737 | other | upstream | 1199221 | 6226717 ~ 6227240 (+) | True | G315581 |
| TU373444 | other | upstream | 1529631 | 5894504 ~ 5896830 (+) | False | shox2 |
| trnat-agu_13 | other | upstream | 2206843 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
| TU374748 | other | downstream | 262110 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU375134 | other | downstream | 829915 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU375135 | other | downstream | 835285 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375607 | other | downstream | 1378533 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
| TU375892 | other | downstream | 1978899 | 9412323 ~ 9415164 (+) | True | G317390 |
