Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU376123 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G317588 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 9821929 ~ 9822142 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376116 | lncRNA | downstream | 12514 | 9809202 ~ 9809415 (-) | True | G317581 |
| TU376115 | lncRNA | downstream | 13166 | 9808562 ~ 9808763 (-) | True | G317580 |
| TU376105 | lncRNA | downstream | 23869 | 9797830 ~ 9798060 (-) | True | G317570 |
| TU376103 | lncRNA | downstream | 26964 | 9794761 ~ 9794965 (-) | True | G317568 |
| TU376081 | lncRNA | downstream | 106091 | 9714360 ~ 9715838 (-) | True | G317547 |
| TU376126 | lncRNA | upstream | 4673 | 9826815 ~ 9827042 (-) | True | G317591 |
| XR_004580288.1 | lncRNA | upstream | 82004 | 9904146 ~ 9944556 (-) | True | LOC117599942 |
| TU376197 | lncRNA | upstream | 135403 | 9957545 ~ 9958446 (-) | True | G317656 |
| TU376215 | lncRNA | upstream | 158855 | 9980997 ~ 9981262 (-) | True | G317664 |
| TU376221 | lncRNA | upstream | 164660 | 9986802 ~ 9990215 (-) | True | G317669 |
| XM_034314862.1 | mRNA | downstream | 33276 | 9715945 ~ 9788653 (-) | False | LOC113533399 |
| XM_026925427.2 | mRNA | upstream | 52641 | 9874783 ~ 9894767 (-) | True | prpf38b |
| XM_034314774.1 | mRNA | upstream | 52641 | 9874783 ~ 9894126 (-) | False | prpf38b |
| XM_034314574.1 | mRNA | upstream | 113081 | 9935223 ~ 9942312 (-) | True | LOC117599941 |
| XM_026925321.2 | mRNA | upstream | 525699 | 10347841 ~ 10392507 (-) | True | wdr47a |
| XM_026924978.2 | mRNA | upstream | 571741 | 10393883 ~ 10460626 (-) | False | camsap2b |
| TU375761 | other | downstream | 848717 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 867819 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 936220 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 1333300 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| XR_004576923.1 | other | downstream | 1963315 | 7858496 ~ 7858614 (-) | True | LOC117595746 |
| TU376553 | other | upstream | 705140 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| trnaw-cca_17 | other | upstream | 1726226 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 4909770 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 5405330 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 5865116 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
