Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU376155 |
| length | 783 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G317618 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 9874996 ~ 9875820 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376060 | lncRNA | upstream | 55531 | 9819266 ~ 9819465 (+) | True | G317529 |
| TU376057 | lncRNA | upstream | 59339 | 9815277 ~ 9815657 (+) | True | G317526 |
| TU376054 | lncRNA | upstream | 63989 | 9810800 ~ 9811007 (+) | True | G317523 |
| TU376052 | lncRNA | upstream | 65825 | 9808847 ~ 9809171 (+) | True | G317521 |
| XR_004580302.1 | lncRNA | upstream | 163096 | 9705920 ~ 9711900 (+) | True | LOC117599959 |
| TU376158 | lncRNA | downstream | 3095 | 9878915 ~ 9879756 (+) | True | G317621 |
| TU376171 | lncRNA | downstream | 64149 | 9939969 ~ 9940237 (+) | True | G317633 |
| TU376260 | lncRNA | downstream | 229946 | 10105766 ~ 10106921 (+) | True | G317703 |
| TU376326 | lncRNA | downstream | 281457 | 10157277 ~ 10157530 (+) | True | G317754 |
| TU376333 | lncRNA | downstream | 310486 | 10186306 ~ 10187126 (+) | True | G317761 |
| XM_034297745.1 | mRNA | upstream | 13848 | 9829378 ~ 9861148 (+) | False | fndc7a |
| XM_034297744.1 | mRNA | upstream | 13849 | 9829380 ~ 9861147 (+) | True | fndc7a |
| XM_034297746.1 | mRNA | upstream | 13850 | 9829382 ~ 9861146 (+) | False | fndc7a |
| XM_034314571.1 | mRNA | upstream | 47108 | 9788997 ~ 9827888 (+) | True | LOC113533145 |
| XM_034314567.1 | mRNA | upstream | 47108 | 9788997 ~ 9827888 (+) | False | LOC113533145 |
| XM_026925101.2 | mRNA | downstream | 67933 | 9943753 ~ 9952320 (+) | True | dnaaf6 |
| XM_026925733.2 | mRNA | downstream | 83173 | 9958993 ~ 9977916 (+) | True | pip4p1a |
| XM_026925090.2 | mRNA | downstream | 105366 | 9981186 ~ 9989044 (+) | True | LOC113533165 |
| XM_026925529.2 | mRNA | downstream | 127836 | 10003656 ~ 10034015 (+) | True | lig1 |
| XM_026925570.2 | mRNA | downstream | 167068 | 10042888 ~ 10053540 (+) | True | mpz |
| TU375892 | other | upstream | 459832 | 9412323 ~ 9415164 (+) | True | G317390 |
| TU375607 | other | upstream | 1062176 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
| TU375135 | other | upstream | 1605798 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375134 | other | upstream | 1610935 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU374748 | other | upstream | 2179077 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU376185 | other | downstream | 83509 | 9959329 ~ 9977901 (+) | False | pip4p1a |
| trnar-ucu_12 | other | downstream | 311931 | 10187751 ~ 10187824 (+) | True | trnar-ucu_12 |
| XR_004580322.1 | other | downstream | 660611 | 10536431 ~ 10562994 (+) | False | capn10 |
| XR_004580323.1 | other | downstream | 660611 | 10536431 ~ 10562614 (+) | False | capn10 |
| TU376560 | other | downstream | 688015 | 10563835 ~ 10568896 (+) | False | eif4e2 |
