Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU376550 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G317953 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 10526265 ~ 10526474 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376540 | lncRNA | downstream | 3837 | 10520613 ~ 10522428 (-) | True | G317943 |
| TU376534 | lncRNA | downstream | 6002 | 10518471 ~ 10520263 (-) | True | G317941 |
| TU376530 | lncRNA | downstream | 29312 | 10496720 ~ 10496953 (-) | True | G317937 |
| TU376510 | lncRNA | downstream | 178945 | 10344638 ~ 10347320 (-) | True | G317918 |
| TU376489 | lncRNA | downstream | 198715 | 10318011 ~ 10327550 (-) | True | G317897 |
| TU376576 | lncRNA | upstream | 35893 | 10562367 ~ 10562528 (-) | True | G317977 |
| TU376575 | lncRNA | upstream | 41274 | 10567748 ~ 10568905 (-) | True | G317976 |
| TU376759 | lncRNA | upstream | 196432 | 10722906 ~ 10723111 (-) | True | G318127 |
| TU376760 | lncRNA | upstream | 196674 | 10723148 ~ 10724215 (-) | True | G318128 |
| TU376845 | lncRNA | upstream | 315194 | 10841668 ~ 10843291 (-) | True | G318198 |
| XM_026924978.2 | mRNA | downstream | 65639 | 10393883 ~ 10460626 (-) | False | camsap2b |
| XM_026924977.2 | mRNA | downstream | 65639 | 10393883 ~ 10460626 (-) | True | camsap2b |
| XM_026924979.2 | mRNA | downstream | 65640 | 10393883 ~ 10460625 (-) | False | camsap2b |
| XM_026925321.2 | mRNA | downstream | 133758 | 10347841 ~ 10392507 (-) | True | wdr47a |
| XM_034314574.1 | mRNA | downstream | 583953 | 9935223 ~ 9942312 (-) | True | LOC117599941 |
| XM_026925864.2 | mRNA | upstream | 876 | 10527350 ~ 10528279 (-) | True | ccl20a.3 |
| XM_026925752.2 | mRNA | upstream | 43711 | 10570185 ~ 10584166 (-) | True | LOC113533548 |
| XM_034314618.1 | mRNA | upstream | 58044 | 10584518 ~ 10596849 (-) | True | chrng |
| XM_034314621.1 | mRNA | upstream | 58044 | 10584518 ~ 10596848 (-) | False | chrng |
| XM_034314620.1 | mRNA | upstream | 58045 | 10584519 ~ 10596847 (-) | False | chrng |
| TU375761 | other | downstream | 1553053 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 1572155 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 1640556 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 2037636 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| XR_004576923.1 | other | downstream | 2667651 | 7858496 ~ 7858614 (-) | True | LOC117595746 |
| TU376553 | other | upstream | 808 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| trnaw-cca_17 | other | upstream | 1021894 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 4205438 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 4700998 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 5160784 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
