Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU376619 |
| length | 273 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G318016 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 10647921 ~ 10648193 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376566 | lncRNA | upstream | 65629 | 10582093 ~ 10582292 (+) | True | G317967 |
| TU376563 | lncRNA | upstream | 72374 | 10575313 ~ 10575547 (+) | True | G317964 |
| TU376562 | lncRNA | upstream | 72769 | 10574814 ~ 10575152 (+) | True | G317963 |
| TU376543 | lncRNA | upstream | 123147 | 10524486 ~ 10524774 (+) | True | G317946 |
| XR_004580283.1 | lncRNA | upstream | 127713 | 10517588 ~ 10520208 (+) | True | LOC117599937 |
| TU376650 | lncRNA | downstream | 58621 | 10706814 ~ 10707508 (+) | True | G318031 |
| TU376631 | lncRNA | downstream | 82218 | 10730411 ~ 10734083 (+) | False | camk2n1a |
| TU376632 | lncRNA | downstream | 82218 | 10730411 ~ 10734083 (+) | False | camk2n1a |
| TU376634 | lncRNA | downstream | 82218 | 10730411 ~ 10734083 (+) | False | camk2n1a |
| TU376635 | lncRNA | downstream | 82218 | 10730411 ~ 10734083 (+) | False | camk2n1a |
| XM_026925353.2 | mRNA | upstream | 79014 | 10563821 ~ 10568907 (+) | True | eif4e2 |
| XM_026925354.2 | mRNA | upstream | 79014 | 10563821 ~ 10568907 (+) | False | eif4e2 |
| XM_034314752.1 | mRNA | upstream | 85306 | 10536431 ~ 10562615 (+) | True | capn10 |
| XM_026925398.2 | mRNA | downstream | 7216 | 10655409 ~ 10704492 (+) | True | vwa5b2 |
| XM_034314588.1 | mRNA | downstream | 7243 | 10655436 ~ 10704492 (+) | False | vwa5b2 |
| XM_034314591.1 | mRNA | downstream | 63515 | 10711708 ~ 10719147 (+) | True | mul1a |
| XM_026925812.2 | mRNA | downstream | 63515 | 10711708 ~ 10719147 (+) | False | mul1a |
| XM_034314592.1 | mRNA | downstream | 63515 | 10711708 ~ 10719147 (+) | False | mul1a |
| TU376560 | other | upstream | 79025 | 10563835 ~ 10568896 (+) | False | eif4e2 |
| XR_004580322.1 | other | upstream | 84927 | 10536431 ~ 10562994 (+) | False | capn10 |
| XR_004580323.1 | other | upstream | 85307 | 10536431 ~ 10562614 (+) | False | capn10 |
| trnar-ucu_12 | other | upstream | 460097 | 10187751 ~ 10187824 (+) | True | trnar-ucu_12 |
| TU376185 | other | upstream | 670020 | 9959329 ~ 9977901 (+) | False | pip4p1a |
| XR_004580315.1 | other | downstream | 751691 | 11399884 ~ 11461068 (+) | False | per2 |
| TU377149 | other | downstream | 819106 | 11467299 ~ 11469499 (+) | True | G318439 |
| trnap-agg_14 | other | downstream | 899915 | 11548108 ~ 11548179 (+) | True | trnap-agg_14 |
| trnai-aau_17 | other | downstream | 900922 | 11549115 ~ 11549188 (+) | True | trnai-aau_17 |
| trnag-ccc_6 | other | downstream | 924634 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
