Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU377280 |
| length | 762 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G318552 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 11400665 ~ 11401502 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU377193 | lncRNA | downstream | 213265 | 11187197 ~ 11187400 (-) | True | G318479 |
| TU376961 | lncRNA | downstream | 391495 | 11007152 ~ 11009170 (-) | True | G318293 |
| TU376853 | lncRNA | downstream | 479103 | 10847475 ~ 10921562 (-) | False | G318202 |
| TU376854 | lncRNA | downstream | 509110 | 10845723 ~ 10891555 (-) | False | G318202 |
| TU376852 | lncRNA | downstream | 552882 | 10845723 ~ 10847783 (-) | False | G318202 |
| XR_004580316.1 | lncRNA | upstream | 3046 | 11404548 ~ 11411161 (-) | False | LOC113533221 |
| TU377282 | lncRNA | upstream | 3872 | 11405374 ~ 11410232 (-) | False | LOC113533221 |
| TU377417 | lncRNA | upstream | 218374 | 11619876 ~ 11705877 (-) | False | wu:fb63a08 |
| XR_004580347.1 | lncRNA | upstream | 228068 | 11629570 ~ 11631921 (-) | True | LOC117599995 |
| XR_004580348.1 | lncRNA | upstream | 228068 | 11629570 ~ 11631912 (-) | False | LOC117599995 |
| XM_034314683.1 | mRNA | downstream | 75419 | 11287176 ~ 11325246 (-) | False | gbp2 |
| XM_034314682.1 | mRNA | downstream | 92511 | 11287176 ~ 11308154 (-) | False | gbp2 |
| XM_034314681.1 | mRNA | downstream | 92511 | 11287176 ~ 11308154 (-) | True | gbp2 |
| XM_034314680.1 | mRNA | downstream | 94444 | 11287176 ~ 11306221 (-) | False | gbp2 |
| XM_034314679.1 | mRNA | downstream | 94564 | 11287176 ~ 11306101 (-) | False | gbp2 |
| XM_026925675.2 | mRNA | upstream | 65618 | 11467120 ~ 11468787 (-) | False | hes6 |
| XM_026925674.2 | mRNA | upstream | 65618 | 11467120 ~ 11468787 (-) | True | hes6 |
| XM_026925725.2 | mRNA | upstream | 91092 | 11492594 ~ 11496391 (-) | True | LOC113533529 |
| XM_026925340.2 | mRNA | upstream | 148281 | 11549783 ~ 11572390 (-) | True | acsl3b |
| XM_034297713.1 | mRNA | upstream | 283333 | 11684835 ~ 11705835 (-) | False | wu:fb63a08 |
| TU376553 | other | downstream | 872415 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 2427453 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 2446555 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 2514956 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 2912036 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| trnaw-cca_17 | other | upstream | 146866 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 3330410 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 3825970 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 4285756 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 4285756 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
