Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU377432 |
| length | 294 |
| lncRNA type | sense_over |
| GC content | 0.24 |
| exon number | 2 |
| gene id | G318639 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 11689489 ~ 11693334 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580347.1 | lncRNA | downstream | 57568 | 11629570 ~ 11631921 (-) | True | LOC117599995 |
| XR_004580348.1 | lncRNA | downstream | 57577 | 11629570 ~ 11631912 (-) | False | LOC117599995 |
| XR_003403404.2 | lncRNA | downstream | 278325 | 11394881 ~ 11411164 (-) | True | LOC113533221 |
| XR_004580316.1 | lncRNA | downstream | 278328 | 11404548 ~ 11411161 (-) | False | LOC113533221 |
| TU377282 | lncRNA | downstream | 279257 | 11405374 ~ 11410232 (-) | False | LOC113533221 |
| TU377454 | lncRNA | upstream | 108313 | 11801647 ~ 11801862 (-) | True | G318660 |
| TU377875 | lncRNA | upstream | 890531 | 12583865 ~ 12584089 (-) | True | G319059 |
| TU377987 | lncRNA | upstream | 940559 | 12633893 ~ 12648886 (-) | True | G319163 |
| TU378012 | lncRNA | upstream | 1061434 | 12754768 ~ 12779226 (-) | True | G319178 |
| TU378017 | lncRNA | upstream | 1070920 | 12764254 ~ 12765991 (-) | True | G319182 |
| XM_026925340.2 | mRNA | downstream | 117099 | 11549783 ~ 11572390 (-) | True | acsl3b |
| XM_026925725.2 | mRNA | downstream | 193098 | 11492594 ~ 11496391 (-) | True | LOC113533529 |
| XM_026925675.2 | mRNA | downstream | 220702 | 11467120 ~ 11468787 (-) | False | hes6 |
| XM_026925674.2 | mRNA | downstream | 220702 | 11467120 ~ 11468787 (-) | True | hes6 |
| XM_034314679.1 | mRNA | downstream | 383388 | 11287176 ~ 11306101 (-) | False | gbp2 |
| XM_026925335.2 | mRNA | upstream | 370532 | 12063866 ~ 12363593 (-) | False | LOC113533285 |
| XM_026925333.2 | mRNA | upstream | 370532 | 12063866 ~ 12363593 (-) | True | LOC113533285 |
| XM_026925363.2 | mRNA | upstream | 743369 | 12436703 ~ 12523017 (-) | True | gpc1b |
| XM_026925637.2 | mRNA | upstream | 941723 | 12635057 ~ 12722764 (-) | False | gpc5c |
| XM_026925636.2 | mRNA | upstream | 941723 | 12635057 ~ 12722763 (-) | True | gpc5c |
| trnaw-cca_17 | other | downstream | 141050 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 1161239 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 2716277 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 2735379 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 2803780 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 3038578 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 3534138 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 3993924 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 3993924 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 4664240 | 16357574 ~ 16367004 (-) | True | G321462 |
