Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU377875 |
| length | 225 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G319059 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 12583865 ~ 12584089 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU377454 | lncRNA | downstream | 782003 | 11801647 ~ 11801862 (-) | True | G318660 |
| TU377417 | lncRNA | downstream | 877988 | 11619876 ~ 11705877 (-) | False | wu:fb63a08 |
| TU377432 | lncRNA | downstream | 890531 | 11689489 ~ 11693334 (-) | True | G318639 |
| XR_004580347.1 | lncRNA | downstream | 951944 | 11629570 ~ 11631921 (-) | True | LOC117599995 |
| XR_004580348.1 | lncRNA | downstream | 951953 | 11629570 ~ 11631912 (-) | False | LOC117599995 |
| TU377987 | lncRNA | upstream | 49804 | 12633893 ~ 12648886 (-) | True | G319163 |
| TU378012 | lncRNA | upstream | 170679 | 12754768 ~ 12779226 (-) | True | G319178 |
| TU378017 | lncRNA | upstream | 180165 | 12764254 ~ 12765991 (-) | True | G319182 |
| TU378022 | lncRNA | upstream | 188560 | 12772649 ~ 12796934 (-) | True | G319186 |
| TU378307 | lncRNA | upstream | 227226 | 12811315 ~ 12856578 (-) | True | G319429 |
| XM_026925363.2 | mRNA | downstream | 60848 | 12436703 ~ 12523017 (-) | True | gpc1b |
| XM_026925335.2 | mRNA | downstream | 220272 | 12063866 ~ 12363593 (-) | False | LOC113533285 |
| XM_026925333.2 | mRNA | downstream | 220272 | 12063866 ~ 12363593 (-) | True | LOC113533285 |
| XM_034297714.1 | mRNA | downstream | 878030 | 11684835 ~ 11705835 (-) | False | wu:fb63a08 |
| XM_026925637.2 | mRNA | upstream | 50968 | 12635057 ~ 12722764 (-) | False | gpc5c |
| XM_026925636.2 | mRNA | upstream | 50968 | 12635057 ~ 12722763 (-) | True | gpc5c |
| XM_034297706.1 | mRNA | upstream | 140845 | 12724934 ~ 12726494 (-) | True | LOC117595730 |
| XM_034297734.1 | mRNA | upstream | 168561 | 12752650 ~ 12754252 (-) | True | LOC113533469 |
| XM_034297707.1 | mRNA | upstream | 172615 | 12756704 ~ 12757144 (-) | True | LOC117595732 |
| trnaw-cca_17 | other | downstream | 1035426 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 2055615 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 3610653 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 3629755 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 3698156 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 2147823 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 2643383 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 3103169 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 3103169 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 3773485 | 16357574 ~ 16367004 (-) | True | G321462 |
