Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378017 |
| length | 401 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G319182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 12764254 ~ 12765991 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko05133 | Pertussis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU377987 | lncRNA | downstream | 115368 | 12633893 ~ 12648886 (-) | True | G319163 |
| TU377875 | lncRNA | downstream | 180165 | 12583865 ~ 12584089 (-) | True | G319059 |
| TU377454 | lncRNA | downstream | 962392 | 11801647 ~ 11801862 (-) | True | G318660 |
| TU377432 | lncRNA | downstream | 1070920 | 11689489 ~ 11693334 (-) | True | G318639 |
| XR_004580348.1 | lncRNA | downstream | 1132342 | 11629570 ~ 11631912 (-) | False | LOC117599995 |
| TU378022 | lncRNA | upstream | 6658 | 12772649 ~ 12796934 (-) | True | G319186 |
| TU378307 | lncRNA | upstream | 45324 | 12811315 ~ 12856578 (-) | True | G319429 |
| TU378345 | lncRNA | upstream | 142488 | 12908479 ~ 12915491 (-) | False | LOC113533649 |
| TU378362 | lncRNA | upstream | 223310 | 12989301 ~ 13021880 (-) | True | G319467 |
| TU378376 | lncRNA | upstream | 263118 | 13029109 ~ 13029704 (-) | True | G319474 |
| XM_034297707.1 | mRNA | downstream | 7110 | 12756704 ~ 12757144 (-) | True | LOC117595732 |
| XM_034297734.1 | mRNA | downstream | 10002 | 12752650 ~ 12754252 (-) | True | LOC113533469 |
| XM_034297706.1 | mRNA | downstream | 37760 | 12724934 ~ 12726494 (-) | True | LOC117595730 |
| XM_026925637.2 | mRNA | downstream | 41490 | 12635057 ~ 12722764 (-) | False | gpc5c |
| XM_026925636.2 | mRNA | downstream | 41491 | 12635057 ~ 12722763 (-) | True | gpc5c |
| XM_034314883.1 | mRNA | upstream | 54080 | 12820071 ~ 12832529 (-) | False | LOC113533584 |
| XM_026925813.2 | mRNA | upstream | 55236 | 12821227 ~ 12832529 (-) | True | LOC113533584 |
| XM_034314884.1 | mRNA | upstream | 55236 | 12821227 ~ 12831523 (-) | False | LOC113533584 |
| XM_034297708.1 | mRNA | upstream | 68683 | 12834674 ~ 12840013 (-) | True | LOC113533473 |
| XM_034314674.1 | mRNA | upstream | 78089 | 12844080 ~ 12905436 (-) | False | svilb |
| trnaw-cca_17 | other | downstream | 1215815 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 2236004 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 3791042 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 3810144 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 3878545 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 1965921 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 2461481 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 2921267 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 2921267 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 3591583 | 16357574 ~ 16367004 (-) | True | G321462 |
