Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378137 |
| length | 715 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G319286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 13037022 ~ 13037736 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU378126 | lncRNA | upstream | 13887 | 13022327 ~ 13023135 (+) | True | G319276 |
| TU378034 | lncRNA | upstream | 231290 | 12805522 ~ 12805732 (+) | True | G319198 |
| TU378003 | lncRNA | upstream | 234003 | 12765055 ~ 12803019 (+) | True | G319170 |
| TU377999 | lncRNA | upstream | 245683 | 12775439 ~ 12791339 (+) | False | G319170 |
| TU378001 | lncRNA | upstream | 257789 | 12773098 ~ 12779233 (+) | False | G319170 |
| TU378165 | lncRNA | downstream | 49527 | 13087263 ~ 13087475 (+) | True | G319314 |
| TU378169 | lncRNA | downstream | 64611 | 13102347 ~ 13102608 (+) | True | G319318 |
| TU378181 | lncRNA | downstream | 102538 | 13140274 ~ 13140482 (+) | True | G319330 |
| TU378185 | lncRNA | downstream | 110916 | 13148652 ~ 13148862 (+) | True | G319334 |
| TU378124 | lncRNA | downstream | 115395 | 13153131 ~ 13154432 (+) | False | sema6ba |
| XM_026925860.2 | mRNA | upstream | 22468 | 13004794 ~ 13014554 (+) | True | abhd17aa |
| XM_026925861.2 | mRNA | upstream | 22468 | 13005779 ~ 13014554 (+) | False | abhd17aa |
| XM_026924981.2 | mRNA | upstream | 54173 | 12968314 ~ 12982849 (+) | True | LOC113533117 |
| XM_034314599.1 | mRNA | upstream | 240198 | 12782537 ~ 12796824 (+) | False | LOC113533470 |
| XM_034297753.1 | mRNA | downstream | 26759 | 13064495 ~ 13154527 (+) | False | sema6ba |
| XM_034297749.1 | mRNA | downstream | 47744 | 13085480 ~ 13154527 (+) | False | sema6ba |
| XM_034297750.1 | mRNA | downstream | 47868 | 13085604 ~ 13154527 (+) | False | sema6ba |
| XM_026925873.2 | mRNA | downstream | 148195 | 13185931 ~ 13216057 (+) | True | rorcb |
| XM_026925322.2 | mRNA | downstream | 179754 | 13217490 ~ 13241937 (+) | True | sh3gl1a |
| TU378000 | other | upstream | 264155 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 1464125 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| trnai-aau_17 | other | upstream | 1487834 | 11549115 ~ 11549188 (+) | True | trnai-aau_17 |
| trnap-agg_14 | other | upstream | 1488843 | 11548108 ~ 11548179 (+) | True | trnap-agg_14 |
| TU377149 | other | upstream | 1567523 | 11467299 ~ 11469499 (+) | True | G318439 |
| XR_004580321.1 | other | downstream | 799697 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | downstream | 799697 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU379509 | other | downstream | 1789529 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| TU380255 | other | downstream | 2831280 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 2892216 | 15929952 ~ 15936768 (+) | False | gpx4b |
