Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378185 |
| length | 211 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G319334 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 13148652 ~ 13148862 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU378181 | lncRNA | upstream | 8170 | 13140274 ~ 13140482 (+) | True | G319330 |
| TU378169 | lncRNA | upstream | 46044 | 13102347 ~ 13102608 (+) | True | G319318 |
| TU378165 | lncRNA | upstream | 61177 | 13087263 ~ 13087475 (+) | True | G319314 |
| TU378137 | lncRNA | upstream | 110916 | 13037022 ~ 13037736 (+) | True | G319286 |
| TU378126 | lncRNA | upstream | 125517 | 13022327 ~ 13023135 (+) | True | G319276 |
| TU378124 | lncRNA | downstream | 4269 | 13153131 ~ 13154432 (+) | False | sema6ba |
| TU378125 | lncRNA | downstream | 7662 | 13156524 ~ 13157729 (+) | True | G319275 |
| TU378192 | lncRNA | downstream | 53171 | 13202033 ~ 13245270 (+) | True | G319340 |
| TU378196 | lncRNA | downstream | 90285 | 13239147 ~ 13306143 (+) | True | G319342 |
| TU378255 | lncRNA | downstream | 214963 | 13363825 ~ 13411607 (+) | True | G319382 |
| XM_026925860.2 | mRNA | upstream | 134098 | 13004794 ~ 13014554 (+) | True | abhd17aa |
| XM_026925861.2 | mRNA | upstream | 134098 | 13005779 ~ 13014554 (+) | False | abhd17aa |
| XM_026924981.2 | mRNA | upstream | 165803 | 12968314 ~ 12982849 (+) | True | LOC113533117 |
| XM_034314599.1 | mRNA | upstream | 351828 | 12782537 ~ 12796824 (+) | False | LOC113533470 |
| XM_026925873.2 | mRNA | downstream | 37069 | 13185931 ~ 13216057 (+) | True | rorcb |
| XM_026925322.2 | mRNA | downstream | 68628 | 13217490 ~ 13241937 (+) | True | sh3gl1a |
| XM_026925325.2 | mRNA | downstream | 104748 | 13253610 ~ 13265447 (+) | True | stap2a |
| XM_026925327.2 | mRNA | downstream | 104843 | 13253705 ~ 13265447 (+) | False | stap2a |
| XM_034314561.1 | mRNA | downstream | 118892 | 13267754 ~ 13285252 (+) | True | sema4e |
| TU378000 | other | upstream | 375785 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 1575755 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| trnai-aau_17 | other | upstream | 1599464 | 11549115 ~ 11549188 (+) | True | trnai-aau_17 |
| trnap-agg_14 | other | upstream | 1600473 | 11548108 ~ 11548179 (+) | True | trnap-agg_14 |
| TU377149 | other | upstream | 1679153 | 11467299 ~ 11469499 (+) | True | G318439 |
| XR_004580321.1 | other | downstream | 688571 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | downstream | 688571 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU379509 | other | downstream | 1678403 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| TU380255 | other | downstream | 2720154 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 2781090 | 15929952 ~ 15936768 (+) | False | gpx4b |
