Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378398 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G319496 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 13069299 ~ 13069522 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU378376 | lncRNA | downstream | 39595 | 13029109 ~ 13029704 (-) | True | G319474 |
| TU378362 | lncRNA | downstream | 47419 | 12989301 ~ 13021880 (-) | True | G319467 |
| TU378345 | lncRNA | downstream | 153808 | 12908479 ~ 12915491 (-) | False | LOC113533649 |
| TU378307 | lncRNA | downstream | 212721 | 12811315 ~ 12856578 (-) | True | G319429 |
| TU378022 | lncRNA | downstream | 272365 | 12772649 ~ 12796934 (-) | True | G319186 |
| TU378446 | lncRNA | upstream | 49266 | 13118788 ~ 13119111 (-) | True | G319544 |
| TU378459 | lncRNA | upstream | 66082 | 13135604 ~ 13135860 (-) | True | G319557 |
| TU378461 | lncRNA | upstream | 66863 | 13136385 ~ 13136589 (-) | True | G319559 |
| TU378470 | lncRNA | upstream | 74541 | 13144063 ~ 13144271 (-) | True | G319568 |
| TU378512 | lncRNA | upstream | 236007 | 13305529 ~ 13309043 (-) | True | G319606 |
| XM_026925491.2 | mRNA | downstream | 69312 | 12986262 ~ 12999987 (-) | False | cdc34b |
| XM_026925492.2 | mRNA | downstream | 69359 | 12986262 ~ 12999940 (-) | True | cdc34b |
| XM_026925673.2 | mRNA | downstream | 104518 | 12940528 ~ 12964781 (-) | True | kcnj9 |
| XM_026925923.2 | mRNA | downstream | 141228 | 12908453 ~ 12928071 (-) | False | LOC113533649 |
| XM_026925700.2 | mRNA | upstream | 92014 | 13161536 ~ 13165217 (-) | True | LOC113533516 |
| XM_026925801.2 | mRNA | upstream | 215850 | 13285372 ~ 13294978 (-) | True | cactin |
| XM_034314616.1 | mRNA | upstream | 237255 | 13306777 ~ 13377178 (-) | False | LOC113533154 |
| XM_034314611.1 | mRNA | upstream | 237255 | 13306777 ~ 13339854 (-) | False | LOC113533154 |
| XM_034314612.1 | mRNA | upstream | 237255 | 13306777 ~ 13339854 (-) | False | LOC113533154 |
| trnaw-cca_17 | other | downstream | 1520860 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 2541049 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 4096087 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 4115189 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 4183590 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 1662390 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 2157950 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 2617736 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 2617736 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 3288052 | 16357574 ~ 16367004 (-) | True | G321462 |
