Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378459 |
| length | 257 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G319557 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 13135604 ~ 13135860 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU378446 | lncRNA | downstream | 16493 | 13118788 ~ 13119111 (-) | True | G319544 |
| TU378398 | lncRNA | downstream | 66082 | 13069299 ~ 13069522 (-) | True | G319496 |
| TU378376 | lncRNA | downstream | 105900 | 13029109 ~ 13029704 (-) | True | G319474 |
| TU378362 | lncRNA | downstream | 113724 | 12989301 ~ 13021880 (-) | True | G319467 |
| TU378345 | lncRNA | downstream | 220113 | 12908479 ~ 12915491 (-) | False | LOC113533649 |
| TU378461 | lncRNA | upstream | 525 | 13136385 ~ 13136589 (-) | True | G319559 |
| TU378470 | lncRNA | upstream | 8203 | 13144063 ~ 13144271 (-) | True | G319568 |
| TU378512 | lncRNA | upstream | 169669 | 13305529 ~ 13309043 (-) | True | G319606 |
| TU378596 | lncRNA | upstream | 286491 | 13422351 ~ 13425952 (-) | True | G319673 |
| TU378597 | lncRNA | upstream | 292151 | 13428011 ~ 13428963 (-) | True | G319674 |
| XM_026925491.2 | mRNA | downstream | 135617 | 12986262 ~ 12999987 (-) | False | cdc34b |
| XM_026925492.2 | mRNA | downstream | 135664 | 12986262 ~ 12999940 (-) | True | cdc34b |
| XM_026925673.2 | mRNA | downstream | 170823 | 12940528 ~ 12964781 (-) | True | kcnj9 |
| XM_026925923.2 | mRNA | downstream | 207533 | 12908453 ~ 12928071 (-) | False | LOC113533649 |
| XM_026925700.2 | mRNA | upstream | 25676 | 13161536 ~ 13165217 (-) | True | LOC113533516 |
| XM_026925801.2 | mRNA | upstream | 149512 | 13285372 ~ 13294978 (-) | True | cactin |
| XM_034314616.1 | mRNA | upstream | 170917 | 13306777 ~ 13377178 (-) | False | LOC113533154 |
| XM_034314611.1 | mRNA | upstream | 170917 | 13306777 ~ 13339854 (-) | False | LOC113533154 |
| XM_034314612.1 | mRNA | upstream | 170917 | 13306777 ~ 13339854 (-) | False | LOC113533154 |
| trnaw-cca_17 | other | downstream | 1587165 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 2607354 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 4162392 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 4181494 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 4249895 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 1596052 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 2091612 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 2551398 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 2551398 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 3221714 | 16357574 ~ 16367004 (-) | True | G321462 |
