Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU379139 |
| length | 635 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G320150 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 14312252 ~ 14312886 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU379088 | lncRNA | upstream | 68098 | 14243952 ~ 14244154 (+) | True | G320099 |
| TU379084 | lncRNA | upstream | 71049 | 14240982 ~ 14241203 (+) | True | G320095 |
| TU379059 | lncRNA | upstream | 105185 | 14206855 ~ 14207067 (+) | True | G320070 |
| TU379046 | lncRNA | upstream | 123238 | 14188740 ~ 14189014 (+) | True | G320057 |
| TU379022 | lncRNA | upstream | 126040 | 14140680 ~ 14186212 (+) | True | G320033 |
| TU379138 | lncRNA | downstream | 2175 | 14315061 ~ 14315318 (+) | True | G320149 |
| TU379170 | lncRNA | downstream | 73352 | 14386238 ~ 14466698 (+) | False | rab31 |
| XR_004576913.1 | lncRNA | downstream | 92093 | 14404979 ~ 14426298 (+) | True | LOC117595736 |
| TU379210 | lncRNA | downstream | 125830 | 14438716 ~ 14453951 (+) | True | G320210 |
| TU379211 | lncRNA | downstream | 142497 | 14455383 ~ 14456457 (+) | True | G320211 |
| XM_026925245.2 | mRNA | upstream | 185240 | 14114774 ~ 14127012 (+) | True | zmp:0000000521 |
| XM_026925244.2 | mRNA | upstream | 185240 | 14114777 ~ 14127012 (+) | False | zmp:0000000521 |
| XM_026925246.2 | mRNA | upstream | 185240 | 14114802 ~ 14127012 (+) | False | zmp:0000000521 |
| XM_026925567.2 | mRNA | upstream | 296881 | 14006357 ~ 14015371 (+) | True | rnf126 |
| XM_026925092.2 | mRNA | upstream | 308552 | 13988603 ~ 14003700 (+) | True | twsg1a |
| XM_026925679.2 | mRNA | downstream | 31708 | 14344594 ~ 14372193 (+) | True | sirt6 |
| XM_034314854.1 | mRNA | downstream | 125477 | 14438363 ~ 14450439 (+) | True | ralbp1 |
| XM_034314855.1 | mRNA | downstream | 125510 | 14438396 ~ 14450439 (+) | False | ralbp1 |
| XM_026925359.2 | mRNA | downstream | 139307 | 14452193 ~ 14466753 (+) | True | rab31 |
| XM_026925176.2 | mRNA | downstream | 168790 | 14481676 ~ 14487383 (+) | True | LOC113533212 |
| XR_004580321.1 | other | upstream | 416587 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | upstream | 416587 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU378000 | other | upstream | 1539385 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 2739355 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| trnai-aau_17 | other | upstream | 2763064 | 11549115 ~ 11549188 (+) | True | trnai-aau_17 |
| TU379509 | other | downstream | 514379 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| TU380255 | other | downstream | 1556130 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 1617066 | 15929952 ~ 15936768 (+) | False | gpx4b |
| XR_004580319.1 | other | downstream | 1787647 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 1799150 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
