Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU379424 |
| length | 426 |
| lncRNA type | read_through |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G320386 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 14613999 ~ 14671669 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU379395 | lncRNA | upstream | 53386 | 14549223 ~ 14560613 (+) | True | G320371 |
| TU379170 | lncRNA | upstream | 147301 | 14386238 ~ 14466698 (+) | False | rab31 |
| TU379212 | lncRNA | upstream | 154990 | 14458672 ~ 14459009 (+) | True | G320212 |
| TU379211 | lncRNA | upstream | 157542 | 14455383 ~ 14456457 (+) | True | G320211 |
| TU379210 | lncRNA | upstream | 160048 | 14438716 ~ 14453951 (+) | True | G320210 |
| TU379658 | lncRNA | downstream | 392088 | 15063757 ~ 15066365 (+) | False | LOC113533366 |
| TU379693 | lncRNA | downstream | 420252 | 15091921 ~ 15096332 (+) | False | LOC113533365 |
| TU379908 | lncRNA | downstream | 552202 | 15223871 ~ 15226072 (+) | True | G320797 |
| TU379931 | lncRNA | downstream | 577846 | 15249515 ~ 15253554 (+) | False | fcer1gl |
| TU379971 | lncRNA | downstream | 630649 | 15302318 ~ 15302730 (+) | False | si:dkeyp-68b7.7 |
| XM_026925370.2 | mRNA | upstream | 19678 | 14550309 ~ 14594321 (+) | False | gna11b |
| XM_034314790.1 | mRNA | upstream | 19678 | 14550310 ~ 14594321 (+) | True | gna11b |
| XM_034314791.1 | mRNA | upstream | 19678 | 14550337 ~ 14594321 (+) | False | gna11b |
| XM_026925176.2 | mRNA | upstream | 126616 | 14481676 ~ 14487383 (+) | True | LOC113533212 |
| XM_026925359.2 | mRNA | upstream | 147246 | 14452193 ~ 14466753 (+) | True | rab31 |
| XM_034314853.1 | mRNA | downstream | 106553 | 14778222 ~ 14804806 (+) | True | scn12aa |
| XM_026925382.2 | mRNA | downstream | 116740 | 14788409 ~ 14804806 (+) | False | scn12aa |
| XM_026925724.2 | mRNA | downstream | 155573 | 14827242 ~ 14828778 (+) | True | ly97.3 |
| XM_026925483.2 | mRNA | downstream | 392052 | 15063721 ~ 15066371 (+) | True | LOC113533366 |
| XM_026925481.2 | mRNA | downstream | 410569 | 15082238 ~ 15101460 (+) | False | LOC113533365 |
| XR_004580321.1 | other | upstream | 718334 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | upstream | 718334 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU378000 | other | upstream | 1841132 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 3041102 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| trnai-aau_17 | other | upstream | 3064811 | 11549115 ~ 11549188 (+) | True | trnai-aau_17 |
| TU379509 | other | downstream | 155596 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| TU380255 | other | downstream | 1197347 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 1258283 | 15929952 ~ 15936768 (+) | False | gpx4b |
| XR_004580319.1 | other | downstream | 1428864 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 1440367 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
