Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU379974 |
| length | 206 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G320843 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 15310604 ~ 15310809 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU379971 | lncRNA | upstream | 7874 | 15302318 ~ 15302730 (+) | False | si:dkeyp-68b7.7 |
| TU379931 | lncRNA | upstream | 57050 | 15249515 ~ 15253554 (+) | False | fcer1gl |
| TU379908 | lncRNA | upstream | 84532 | 15223871 ~ 15226072 (+) | True | G320797 |
| TU379693 | lncRNA | upstream | 214272 | 15091921 ~ 15096332 (+) | False | LOC113533365 |
| TU379658 | lncRNA | upstream | 244239 | 15063757 ~ 15066365 (+) | False | LOC113533366 |
| TU379980 | lncRNA | downstream | 29757 | 15340566 ~ 15341207 (+) | True | G320848 |
| TU380071 | lncRNA | downstream | 151045 | 15461854 ~ 15463232 (+) | True | G320935 |
| TU380086 | lncRNA | downstream | 233088 | 15543897 ~ 15546092 (+) | True | G320949 |
| TU380088 | lncRNA | downstream | 255745 | 15566554 ~ 15570473 (+) | True | LOC113533167 |
| TU380114 | lncRNA | downstream | 259885 | 15570694 ~ 15571089 (+) | True | G320977 |
| XM_026925820.2 | mRNA | upstream | 7316 | 15299061 ~ 15303288 (+) | True | si:dkeyp-68b7.7 |
| XM_026925821.2 | mRNA | upstream | 13068 | 15292775 ~ 15297536 (+) | True | si:dkeyp-68b7.5 |
| XM_026925027.2 | mRNA | upstream | 17980 | 15281241 ~ 15292624 (+) | True | si:dkeyp-68b7.12 |
| XM_026925029.2 | mRNA | upstream | 41985 | 15255190 ~ 15268619 (+) | True | nectin4b |
| XM_034314546.1 | mRNA | upstream | 42788 | 15255190 ~ 15267816 (+) | False | nectin4b |
| XM_026925777.2 | mRNA | downstream | 3056 | 15313865 ~ 15320984 (+) | True | LOC113533560 |
| XM_034297699.1 | mRNA | downstream | 3311 | 15314120 ~ 15320984 (+) | False | LOC113533560 |
| XM_026925661.2 | mRNA | downstream | 10652 | 15321461 ~ 15326058 (+) | True | tpgs1 |
| XM_034314712.1 | mRNA | downstream | 21893 | 15332702 ~ 15337978 (+) | False | sf3a2 |
| XM_026925548.2 | mRNA | downstream | 22321 | 15333130 ~ 15337978 (+) | True | sf3a2 |
| TU379509 | other | upstream | 481833 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| XR_004580321.1 | other | upstream | 1414939 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | upstream | 1414939 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU378000 | other | upstream | 2537737 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 3737707 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| TU380255 | other | downstream | 558207 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 619143 | 15929952 ~ 15936768 (+) | False | gpx4b |
| XR_004580319.1 | other | downstream | 789724 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 801227 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| TU380434 | other | downstream | 820526 | 16131335 ~ 16132364 (+) | True | G321257 |
