Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380003 |
| length | 304 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G320870 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 15285638 ~ 15285941 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380001 | lncRNA | downstream | 1213 | 15283635 ~ 15284425 (-) | True | G320868 |
| TU380000 | lncRNA | downstream | 2898 | 15282360 ~ 15282740 (-) | True | G320867 |
| TU379997 | lncRNA | downstream | 4000 | 15281435 ~ 15281638 (-) | True | G320864 |
| TU379941 | lncRNA | downstream | 55628 | 15229603 ~ 15230010 (-) | False | LOC113533479 |
| XR_003403412.2 | lncRNA | downstream | 181175 | 15095677 ~ 15104463 (-) | True | LOC113533367 |
| TU380004 | lncRNA | upstream | 143 | 15286084 ~ 15286877 (-) | True | G320871 |
| TU380013 | lncRNA | upstream | 17870 | 15303811 ~ 15304025 (-) | True | G320880 |
| TU380032 | lncRNA | upstream | 94194 | 15380135 ~ 15460416 (-) | True | G320897 |
| TU380184 | lncRNA | upstream | 306219 | 15592160 ~ 15592616 (-) | True | G321032 |
| XR_003403423.2 | lncRNA | upstream | 401141 | 15687082 ~ 15724356 (-) | False | LOC113533563 |
| XM_026925032.2 | mRNA | downstream | 5672 | 15274921 ~ 15279966 (-) | True | si:ch211-155e24.3 |
| XM_026925034.2 | mRNA | downstream | 13479 | 15269159 ~ 15272159 (-) | True | LOC113533136 |
| XM_026925033.2 | mRNA | downstream | 13482 | 15269159 ~ 15272156 (-) | False | LOC113533136 |
| XM_026925644.2 | mRNA | downstream | 54384 | 15222778 ~ 15231254 (-) | True | LOC113533479 |
| XM_026925177.2 | mRNA | upstream | 18337 | 15304278 ~ 15306780 (-) | True | LOC113533213 |
| XM_026925696.2 | mRNA | upstream | 43071 | 15329012 ~ 15332661 (-) | True | plekhj1 |
| XM_026925736.2 | mRNA | upstream | 52796 | 15338737 ~ 15349506 (-) | True | LOC113533539 |
| XM_026925734.2 | mRNA | upstream | 177675 | 15463616 ~ 15489260 (-) | True | onecut3b |
| XM_034297689.1 | mRNA | upstream | 308494 | 15594435 ~ 15648744 (-) | False | LOC113533480 |
| TU379938 | other | downstream | 56382 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU379789 | other | downstream | 540151 | 14731912 ~ 14745487 (-) | False | theg |
| trnaw-cca_17 | other | downstream | 3737199 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 4757388 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 6312426 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| TU380215 | other | upstream | 401317 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 401317 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 1071633 | 16357574 ~ 16367004 (-) | True | G321462 |
| XR_003403441.1 | other | upstream | 1333692 | 16619633 ~ 16619734 (-) | True | LOC113533663 |
| trnal-uaa_3 | other | upstream | 1687747 | 16973688 ~ 16973770 (-) | False | trnal-uaa_3 |
