Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380032 |
| length | 332 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G320897 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 15380135 ~ 15460416 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380013 | lncRNA | downstream | 76110 | 15303811 ~ 15304025 (-) | True | G320880 |
| TU380004 | lncRNA | downstream | 93258 | 15286084 ~ 15286877 (-) | True | G320871 |
| TU380003 | lncRNA | downstream | 94194 | 15285638 ~ 15285941 (-) | True | G320870 |
| TU380001 | lncRNA | downstream | 95710 | 15283635 ~ 15284425 (-) | True | G320868 |
| TU380000 | lncRNA | downstream | 97395 | 15282360 ~ 15282740 (-) | True | G320867 |
| TU380184 | lncRNA | upstream | 131744 | 15592160 ~ 15592616 (-) | True | G321032 |
| XR_003403423.2 | lncRNA | upstream | 226666 | 15687082 ~ 15724356 (-) | False | LOC113533563 |
| XR_004580366.1 | lncRNA | upstream | 226666 | 15687082 ~ 15717536 (-) | False | LOC113533563 |
| XR_003403425.2 | lncRNA | upstream | 226666 | 15687082 ~ 15713172 (-) | False | LOC113533563 |
| XR_003403422.2 | lncRNA | upstream | 226666 | 15687082 ~ 15713172 (-) | False | LOC113533563 |
| XM_026925736.2 | mRNA | downstream | 30629 | 15338737 ~ 15349506 (-) | True | LOC113533539 |
| XM_026925696.2 | mRNA | downstream | 47474 | 15329012 ~ 15332661 (-) | True | plekhj1 |
| XM_026925177.2 | mRNA | downstream | 73355 | 15304278 ~ 15306780 (-) | True | LOC113533213 |
| XM_026925032.2 | mRNA | downstream | 100169 | 15274921 ~ 15279966 (-) | True | si:ch211-155e24.3 |
| XM_026925034.2 | mRNA | downstream | 107976 | 15269159 ~ 15272159 (-) | True | LOC113533136 |
| XM_026925734.2 | mRNA | upstream | 3200 | 15463616 ~ 15489260 (-) | True | onecut3b |
| XM_034297689.1 | mRNA | upstream | 134019 | 15594435 ~ 15648744 (-) | False | LOC113533480 |
| XM_034297688.1 | mRNA | upstream | 134019 | 15594435 ~ 15648744 (-) | True | LOC113533480 |
| XM_026925125.2 | mRNA | upstream | 394087 | 15854503 ~ 15861482 (-) | True | zgc:85843 |
| XM_026925307.2 | mRNA | upstream | 463805 | 15924221 ~ 15929067 (-) | True | polr2ea |
| TU379938 | other | downstream | 150879 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU379789 | other | downstream | 634648 | 14731912 ~ 14745487 (-) | False | theg |
| trnaw-cca_17 | other | downstream | 3831696 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 4851885 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 6406923 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| TU380215 | other | upstream | 226842 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 226842 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 897158 | 16357574 ~ 16367004 (-) | True | G321462 |
| XR_003403441.1 | other | upstream | 1159217 | 16619633 ~ 16619734 (-) | True | LOC113533663 |
| trnal-uaa_3 | other | upstream | 1513272 | 16973688 ~ 16973770 (-) | False | trnal-uaa_3 |
