Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380114 |
| length | 396 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G320977 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 15570694 ~ 15571089 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0072330 | monocarboxylic acid biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380088 | lncRNA | upstream | 221 | 15566554 ~ 15570473 (+) | True | LOC113533167 |
| TU380086 | lncRNA | upstream | 24602 | 15543897 ~ 15546092 (+) | True | G320949 |
| TU380071 | lncRNA | upstream | 107462 | 15461854 ~ 15463232 (+) | True | G320935 |
| TU379980 | lncRNA | upstream | 229487 | 15340566 ~ 15341207 (+) | True | G320848 |
| TU379974 | lncRNA | upstream | 259885 | 15310604 ~ 15310809 (+) | True | G320843 |
| TU380120 | lncRNA | downstream | 24935 | 15596024 ~ 15596226 (+) | True | G320981 |
| TU380127 | lncRNA | downstream | 42105 | 15613194 ~ 15613541 (+) | True | G320988 |
| TU380130 | lncRNA | downstream | 44908 | 15615997 ~ 15616218 (+) | True | G320991 |
| TU380131 | lncRNA | downstream | 45822 | 15616911 ~ 15617123 (+) | True | G320992 |
| TU380138 | lncRNA | downstream | 54713 | 15625802 ~ 15682209 (+) | False | slc25a42 |
| XM_026925093.2 | mRNA | upstream | 216 | 15566560 ~ 15570478 (+) | False | LOC113533167 |
| XM_026925493.2 | mRNA | upstream | 6909 | 15534922 ~ 15563785 (+) | True | tcf3a |
| XM_026925495.2 | mRNA | upstream | 6909 | 15534922 ~ 15563785 (+) | False | tcf3a |
| XM_026925494.2 | mRNA | upstream | 6909 | 15534922 ~ 15563785 (+) | False | tcf3a |
| XM_026925701.2 | mRNA | upstream | 49473 | 15514412 ~ 15521221 (+) | True | map2k2b |
| XM_026925252.2 | mRNA | downstream | 875 | 15571964 ~ 15578078 (+) | True | mbd3a |
| XM_026925253.2 | mRNA | downstream | 877 | 15571966 ~ 15578078 (+) | False | mbd3a |
| XM_026925254.2 | mRNA | downstream | 877 | 15571966 ~ 15578078 (+) | False | mbd3a |
| XM_026925255.2 | mRNA | downstream | 878 | 15571967 ~ 15578078 (+) | False | mbd3a |
| XM_026925249.2 | mRNA | downstream | 8932 | 15580021 ~ 15586283 (+) | True | LOC113533252 |
| TU379509 | other | upstream | 741923 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| XR_004580321.1 | other | upstream | 1675029 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | upstream | 1675029 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU378000 | other | upstream | 2797827 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 3997797 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| TU380255 | other | downstream | 297927 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 358863 | 15929952 ~ 15936768 (+) | False | gpx4b |
| XR_004580319.1 | other | downstream | 529444 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 540947 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| TU380434 | other | downstream | 560246 | 16131335 ~ 16132364 (+) | True | G321257 |
