Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380127 |
| length | 348 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G320988 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 15613194 ~ 15613541 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380120 | lncRNA | upstream | 16968 | 15596024 ~ 15596226 (+) | True | G320981 |
| TU380114 | lncRNA | upstream | 42105 | 15570694 ~ 15571089 (+) | True | G320977 |
| TU380088 | lncRNA | upstream | 42721 | 15566554 ~ 15570473 (+) | True | LOC113533167 |
| TU380086 | lncRNA | upstream | 67102 | 15543897 ~ 15546092 (+) | True | G320949 |
| TU380071 | lncRNA | upstream | 149962 | 15461854 ~ 15463232 (+) | True | G320935 |
| TU380130 | lncRNA | downstream | 2456 | 15615997 ~ 15616218 (+) | True | G320991 |
| TU380131 | lncRNA | downstream | 3370 | 15616911 ~ 15617123 (+) | True | G320992 |
| TU380138 | lncRNA | downstream | 12261 | 15625802 ~ 15682209 (+) | False | slc25a42 |
| XR_004576905.1 | lncRNA | downstream | 69530 | 15683071 ~ 15704584 (+) | True | LOC117600003 |
| TU380377 | lncRNA | downstream | 408945 | 16022486 ~ 16023068 (+) | True | G321203 |
| XM_026925249.2 | mRNA | upstream | 26911 | 15580021 ~ 15586283 (+) | True | LOC113533252 |
| XM_026925252.2 | mRNA | upstream | 35116 | 15571964 ~ 15578078 (+) | True | mbd3a |
| XM_026925561.2 | mRNA | downstream | 37080 | 15650621 ~ 15658676 (+) | True | LOC113533414 |
| XM_026925001.2 | mRNA | downstream | 46435 | 15659976 ~ 15666070 (+) | True | armc6 |
| XM_026925405.2 | mRNA | downstream | 54212 | 15667753 ~ 15682276 (+) | True | slc25a42 |
| XM_034297740.1 | mRNA | downstream | 184650 | 15798191 ~ 15842389 (+) | True | LOC113533481 |
| XM_026925305.2 | mRNA | downstream | 249606 | 15863147 ~ 15890456 (+) | True | sbno2a |
| TU379509 | other | upstream | 784423 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| XR_004580321.1 | other | upstream | 1717529 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_003403405.2 | other | upstream | 1717529 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| TU378000 | other | upstream | 2840327 | 12765055 ~ 12772867 (+) | False | G319170 |
| trnag-ccc_6 | other | upstream | 4040297 | 11572827 ~ 11572897 (+) | True | trnag-ccc_6 |
| TU380255 | other | downstream | 255475 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU380359 | other | downstream | 316411 | 15929952 ~ 15936768 (+) | False | gpx4b |
| XR_004580319.1 | other | downstream | 486992 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 498495 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| TU380434 | other | downstream | 517794 | 16131335 ~ 16132364 (+) | True | G321257 |
