Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380422 |
| length | 1139 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G321246 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 16096253 ~ 16097391 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380421 | lncRNA | upstream | 24 | 16095903 ~ 16096229 (+) | True | G321245 |
| TU380416 | lncRNA | upstream | 2429 | 16091596 ~ 16093824 (+) | True | G321241 |
| TU380414 | lncRNA | upstream | 5854 | 16089606 ~ 16090399 (+) | True | G321239 |
| TU380411 | lncRNA | upstream | 27037 | 16069004 ~ 16069216 (+) | True | G321236 |
| TU380410 | lncRNA | upstream | 27706 | 16068027 ~ 16068547 (+) | True | G321235 |
| TU380423 | lncRNA | downstream | 1224 | 16098615 ~ 16099001 (+) | True | G321247 |
| TU380430 | lncRNA | downstream | 31810 | 16129201 ~ 16129800 (+) | True | G321253 |
| TU380431 | lncRNA | downstream | 32558 | 16129949 ~ 16130269 (+) | True | G321254 |
| TU380432 | lncRNA | downstream | 33031 | 16130422 ~ 16130684 (+) | True | G321255 |
| TU380433 | lncRNA | downstream | 33339 | 16130730 ~ 16131005 (+) | True | G321256 |
| XM_026925672.2 | mRNA | upstream | 54515 | 16039835 ~ 16041738 (+) | True | uba52 |
| XM_034314914.1 | mRNA | upstream | 58073 | 16028370 ~ 16038180 (+) | True | cers4b |
| XM_026925779.2 | mRNA | upstream | 96813 | 15992220 ~ 15999440 (+) | True | rab11bb |
| XM_034314824.1 | mRNA | upstream | 111668 | 15938895 ~ 15984585 (+) | False | pip5k1cb |
| XM_026925364.2 | mRNA | downstream | 3142 | 16100533 ~ 16102442 (+) | True | jund |
| XM_026925606.2 | mRNA | downstream | 14644 | 16112035 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| XM_034314867.1 | mRNA | downstream | 14645 | 16112036 ~ 16117345 (+) | True | si:ch211-178n15.1 |
| XM_026925885.2 | mRNA | downstream | 65063 | 16162454 ~ 16167346 (+) | True | cplx4c |
| XM_026925384.2 | mRNA | downstream | 77179 | 16174570 ~ 16180499 (+) | True | rx2 |
| TU380359 | other | upstream | 159485 | 15929952 ~ 15936768 (+) | False | gpx4b |
| TU380255 | other | upstream | 225258 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU379509 | other | upstream | 1267482 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| XR_004580321.1 | other | upstream | 2200588 | 13837433 ~ 13895665 (+) | False | LOC113533270 |
| XR_004580319.1 | other | downstream | 3142 | 16100533 ~ 16111089 (+) | False | jund |
| XR_003403417.2 | other | downstream | 14645 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| TU380434 | other | downstream | 33944 | 16131335 ~ 16132364 (+) | True | G321257 |
| trnag-gcc_18 | other | downstream | 86681 | 16184072 ~ 16184142 (+) | True | trnag-gcc_18 |
| trnag-gcc_19 | other | downstream | 88106 | 16185497 ~ 16185567 (+) | True | trnag-gcc_19 |
