Item | Value |
---|---|
RNA id | TU380433 |
length | 276 |
lncRNA type | inter_gene |
GC content | 0.46 |
exon number | 1 |
gene id | G321256 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047615.1 |
NCBI id | CM018561.1 |
chromosome length | 21248730 |
location | 16130730 ~ 16131005 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU380432 | lncRNA | upstream | 46 | 16130422 ~ 16130684 (+) | True | G321255 |
TU380431 | lncRNA | upstream | 461 | 16129949 ~ 16130269 (+) | True | G321254 |
TU380430 | lncRNA | upstream | 930 | 16129201 ~ 16129800 (+) | True | G321253 |
TU380423 | lncRNA | upstream | 31729 | 16098615 ~ 16099001 (+) | True | G321247 |
TU380422 | lncRNA | upstream | 33339 | 16096253 ~ 16097391 (+) | True | G321246 |
TU380437 | lncRNA | downstream | 4319 | 16135324 ~ 16137604 (+) | True | G321258 |
XR_004580325.1 | lncRNA | downstream | 54615 | 16185620 ~ 16187003 (+) | True | LOC117599979 |
TU380634 | lncRNA | downstream | 255252 | 16386257 ~ 16386523 (+) | True | G321429 |
TU380639 | lncRNA | downstream | 305194 | 16436199 ~ 16446124 (+) | True | G321434 |
TU380640 | lncRNA | downstream | 325438 | 16456443 ~ 16457168 (+) | True | G321435 |
XM_026925606.2 | mRNA | upstream | 10697 | 16112035 ~ 16120033 (+) | False | si:ch211-178n15.1 |
XM_034314867.1 | mRNA | upstream | 13385 | 16112036 ~ 16117345 (+) | True | si:ch211-178n15.1 |
XM_026925364.2 | mRNA | upstream | 28288 | 16100533 ~ 16102442 (+) | True | jund |
XM_026925672.2 | mRNA | upstream | 88992 | 16039835 ~ 16041738 (+) | True | uba52 |
XM_034314914.1 | mRNA | upstream | 92550 | 16028370 ~ 16038180 (+) | True | cers4b |
XM_026925885.2 | mRNA | downstream | 31449 | 16162454 ~ 16167346 (+) | True | cplx4c |
XM_026925384.2 | mRNA | downstream | 43565 | 16174570 ~ 16180499 (+) | True | rx2 |
XM_026925383.2 | mRNA | downstream | 56984 | 16187989 ~ 16193122 (+) | True | calr3b |
XM_026925167.2 | mRNA | downstream | 65919 | 16196924 ~ 16223330 (+) | True | eps15l1b |
XM_026925172.2 | mRNA | downstream | 65919 | 16196924 ~ 16223330 (+) | False | eps15l1b |
XR_003403417.2 | other | upstream | 10697 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
XR_004580319.1 | other | upstream | 19641 | 16100533 ~ 16111089 (+) | False | jund |
TU380359 | other | upstream | 193962 | 15929952 ~ 15936768 (+) | False | gpx4b |
TU380255 | other | upstream | 259735 | 15869016 ~ 15870995 (+) | True | G321088 |
TU379509 | other | upstream | 1301959 | 14827265 ~ 14828771 (+) | False | ly97.3 |
TU380434 | other | downstream | 330 | 16131335 ~ 16132364 (+) | True | G321257 |
trnag-gcc_18 | other | downstream | 53067 | 16184072 ~ 16184142 (+) | True | trnag-gcc_18 |
trnag-gcc_19 | other | downstream | 54492 | 16185497 ~ 16185567 (+) | True | trnag-gcc_19 |
trnag-gcc_20 | other | downstream | 55966 | 16186971 ~ 16187041 (+) | True | trnag-gcc_20 |
TU380835 | other | downstream | 720440 | 16851445 ~ 16852424 (+) | False | LOC117599970 |