Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU380434 |
| length | 1030 |
| RNA type | TUCP |
| GC content | 0.60 |
| exon number | 1 |
| gene id | G321257 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 16131335 ~ 16132364 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380433 | lncRNA | upstream | 330 | 16130730 ~ 16131005 (+) | True | G321256 |
| TU380432 | lncRNA | upstream | 651 | 16130422 ~ 16130684 (+) | True | G321255 |
| TU380431 | lncRNA | upstream | 1066 | 16129949 ~ 16130269 (+) | True | G321254 |
| TU380430 | lncRNA | upstream | 1535 | 16129201 ~ 16129800 (+) | True | G321253 |
| TU380423 | lncRNA | upstream | 32334 | 16098615 ~ 16099001 (+) | True | G321247 |
| TU380437 | lncRNA | downstream | 2960 | 16135324 ~ 16137604 (+) | True | G321258 |
| XR_004580325.1 | lncRNA | downstream | 53256 | 16185620 ~ 16187003 (+) | True | LOC117599979 |
| TU380634 | lncRNA | downstream | 253893 | 16386257 ~ 16386523 (+) | True | G321429 |
| TU380639 | lncRNA | downstream | 303835 | 16436199 ~ 16446124 (+) | True | G321434 |
| TU380640 | lncRNA | downstream | 324079 | 16456443 ~ 16457168 (+) | True | G321435 |
| XM_026925606.2 | mRNA | upstream | 11302 | 16112035 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| XM_034314867.1 | mRNA | upstream | 13990 | 16112036 ~ 16117345 (+) | True | si:ch211-178n15.1 |
| XM_026925364.2 | mRNA | upstream | 28893 | 16100533 ~ 16102442 (+) | True | jund |
| XM_026925672.2 | mRNA | upstream | 89597 | 16039835 ~ 16041738 (+) | True | uba52 |
| XM_034314914.1 | mRNA | upstream | 93155 | 16028370 ~ 16038180 (+) | True | cers4b |
| XM_026925885.2 | mRNA | downstream | 30090 | 16162454 ~ 16167346 (+) | True | cplx4c |
| XM_026925384.2 | mRNA | downstream | 42206 | 16174570 ~ 16180499 (+) | True | rx2 |
| XM_026925383.2 | mRNA | downstream | 55625 | 16187989 ~ 16193122 (+) | True | calr3b |
| XM_026925167.2 | mRNA | downstream | 64560 | 16196924 ~ 16223330 (+) | True | eps15l1b |
| XM_026925172.2 | mRNA | downstream | 64560 | 16196924 ~ 16223330 (+) | False | eps15l1b |
| XR_003403417.2 | other | upstream | 11302 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| XR_004580319.1 | other | upstream | 20246 | 16100533 ~ 16111089 (+) | False | jund |
| TU380359 | other | upstream | 194567 | 15929952 ~ 15936768 (+) | False | gpx4b |
| TU380255 | other | upstream | 260340 | 15869016 ~ 15870995 (+) | True | G321088 |
| TU379509 | other | upstream | 1302564 | 14827265 ~ 14828771 (+) | False | ly97.3 |
| trnag-gcc_18 | other | downstream | 51708 | 16184072 ~ 16184142 (+) | True | trnag-gcc_18 |
| trnag-gcc_19 | other | downstream | 53133 | 16185497 ~ 16185567 (+) | True | trnag-gcc_19 |
| trnag-gcc_20 | other | downstream | 54607 | 16186971 ~ 16187041 (+) | True | trnag-gcc_20 |
| TU380835 | other | downstream | 719081 | 16851445 ~ 16852424 (+) | False | LOC117599970 |
| XR_004580277.1 | other | downstream | 1346470 | 17478834 ~ 17483677 (+) | False | fuz |
