Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU381774 |
| length | 576 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 2 |
| gene id | si:ch211-162e15.3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 18225921 ~ 18227233 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU381739 | lncRNA | upstream | 26853 | 18198840 ~ 18199709 (+) | True | G322365 |
| TU381693 | lncRNA | upstream | 151814 | 18074329 ~ 18074748 (+) | True | G322324 |
| TU381586 | lncRNA | upstream | 371304 | 17854548 ~ 17855258 (+) | True | G322233 |
| TU381490 | lncRNA | upstream | 439861 | 17721938 ~ 17786701 (+) | True | G322146 |
| TU381461 | lncRNA | upstream | 560349 | 17589072 ~ 17666213 (+) | False | npc1 |
| TU381778 | lncRNA | downstream | 2162 | 18229395 ~ 18231463 (+) | True | G322398 |
| TU381788 | lncRNA | downstream | 111096 | 18338329 ~ 18343490 (+) | True | G322405 |
| TU381790 | lncRNA | downstream | 111096 | 18338329 ~ 18343490 (+) | False | G322405 |
| TU381819 | lncRNA | downstream | 143494 | 18370727 ~ 18373883 (+) | True | G322429 |
| TU381841 | lncRNA | downstream | 205093 | 18432326 ~ 18432702 (+) | True | G322446 |
| XM_026946304.2 | mRNA | upstream | 231884 | 17990725 ~ 17994678 (+) | True | bambib |
| XM_026946277.2 | mRNA | upstream | 247440 | 17965893 ~ 17979122 (+) | True | wacb |
| XM_026946278.2 | mRNA | upstream | 247440 | 17966188 ~ 17979122 (+) | False | wacb |
| XM_026946276.2 | mRNA | upstream | 247440 | 17966192 ~ 17979122 (+) | False | wacb |
| XM_026946314.2 | mRNA | upstream | 354533 | 17860311 ~ 17872029 (+) | True | rab18b |
| XM_034314516.1 | mRNA | downstream | 166790 | 18394023 ~ 18430022 (+) | False | pex5lb |
| XM_026946262.2 | mRNA | downstream | 166790 | 18394023 ~ 18430022 (+) | True | pex5lb |
| XM_034314517.1 | mRNA | downstream | 166790 | 18394023 ~ 18430022 (+) | False | pex5lb |
| XM_026946263.2 | mRNA | downstream | 166790 | 18394023 ~ 18430022 (+) | False | pex5lb |
| XM_026946264.2 | mRNA | downstream | 166790 | 18394023 ~ 18430022 (+) | False | pex5lb |
| XR_003404718.2 | other | upstream | 594954 | 17570649 ~ 17631608 (+) | False | egfra |
| XR_004580277.1 | other | upstream | 742885 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_004580278.1 | other | upstream | 742885 | 17478834 ~ 17483677 (+) | False | fuz |
| TU380835 | other | upstream | 1374138 | 16851445 ~ 16852424 (+) | False | LOC117599970 |
| trnag-gcc_20 | other | upstream | 2039521 | 16186971 ~ 16187041 (+) | True | trnag-gcc_20 |
| TU381842 | other | downstream | 188584 | 18415817 ~ 18422631 (+) | False | pex5lb |
| XR_004580282.1 | other | downstream | 588776 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU383181 | other | downstream | 2211469 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 2410351 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 2688171 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
