Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU382523 |
| length | 402 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 3 |
| gene id | G323007 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 19055487 ~ 19066748 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko03460 | Fanconi anemia pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU382356 | lncRNA | downstream | 68681 | 18985196 ~ 18986806 (-) | False | mrpl37 |
| TU382364 | lncRNA | downstream | 98870 | 18942578 ~ 18956617 (-) | True | G322889 |
| TU382315 | lncRNA | downstream | 243110 | 18812010 ~ 18812377 (-) | True | G322849 |
| TU382296 | lncRNA | downstream | 290488 | 18764759 ~ 18764999 (-) | True | G322831 |
| TU382292 | lncRNA | downstream | 298840 | 18756373 ~ 18756647 (-) | True | G322827 |
| TU382529 | lncRNA | upstream | 8252 | 19075000 ~ 19077917 (-) | True | G323011 |
| XR_004580356.1 | lncRNA | upstream | 131312 | 19198060 ~ 19204380 (-) | True | LOC117600001 |
| TU382620 | lncRNA | upstream | 151095 | 19217843 ~ 19220218 (-) | True | G323088 |
| TU382623 | lncRNA | upstream | 163606 | 19230354 ~ 19275396 (-) | True | LOC117599938 |
| XR_004580284.1 | lncRNA | upstream | 163905 | 19230653 ~ 19275390 (-) | False | LOC117599938 |
| XM_026946326.2 | mRNA | downstream | 2345 | 19043896 ~ 19053142 (-) | True | gfi1aa |
| XM_034314837.1 | mRNA | downstream | 27604 | 19016482 ~ 19027883 (-) | True | glmna |
| XM_026946327.2 | mRNA | downstream | 49108 | 19003326 ~ 19006379 (-) | False | tceanc2 |
| XM_034314784.1 | mRNA | downstream | 60851 | 18985173 ~ 18994636 (-) | True | mrpl37 |
| XM_026946193.2 | mRNA | downstream | 106171 | 18936784 ~ 18949316 (-) | True | acot11a |
| XM_026946361.2 | mRNA | upstream | 11975 | 19078723 ~ 19091689 (-) | True | dipk1aa |
| XM_026946363.2 | mRNA | upstream | 15796 | 19082544 ~ 19091688 (-) | False | dipk1aa |
| XM_026946372.2 | mRNA | upstream | 123566 | 19190314 ~ 19197494 (-) | True | LOC113546473 |
| XM_026946371.2 | mRNA | upstream | 123566 | 19190314 ~ 19197493 (-) | False | LOC113546473 |
| XM_026946127.2 | mRNA | upstream | 160002 | 19226750 ~ 19229596 (-) | True | gadd45aa |
| XR_004576919.1 | other | downstream | 49108 | 19003239 ~ 19006379 (-) | True | tceanc2 |
| TU382290 | other | downstream | 299894 | 18753772 ~ 18755593 (-) | True | G322826 |
| trnav-aac_21 | other | downstream | 308243 | 18747172 ~ 18747244 (-) | True | trnav-aac_21 |
| TU381951 | other | downstream | 660664 | 18394249 ~ 18394823 (-) | True | G322538 |
| TU381602 | other | downstream | 1183379 | 17855329 ~ 17872108 (-) | False | LOC113546399 |
| TU382527 | other | upstream | 8252 | 19075000 ~ 19077917 (-) | False | G323011 |
| XR_004580317.1 | other | upstream | 431813 | 19498561 ~ 19507197 (-) | False | kdm4ab |
| TU383446 | other | upstream | 1128546 | 20195294 ~ 20195672 (-) | True | G323726 |
| XR_003404720.2 | other | upstream | 1242749 | 20309497 ~ 20309573 (-) | True | LOC113546475 |
| XR_004576925.1 | other | upstream | 1248389 | 20315137 ~ 20315212 (-) | True | LOC117595748 |
