Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU382760 |
| length | 986 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G323206 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 19582317 ~ 19583323 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU382711 | lncRNA | upstream | 59284 | 19512724 ~ 19523033 (+) | False | G323168 |
| TU382712 | lncRNA | upstream | 59284 | 19512724 ~ 19523033 (+) | True | G323168 |
| TU382639 | lncRNA | upstream | 144242 | 19434230 ~ 19438075 (+) | True | G323104 |
| TU382511 | lncRNA | upstream | 266269 | 19313879 ~ 19316048 (+) | False | LOC113546339 |
| TU382490 | lncRNA | upstream | 364079 | 19204678 ~ 19218238 (+) | False | gng12a |
| TU382800 | lncRNA | downstream | 60500 | 19643823 ~ 19644570 (+) | True | G323240 |
| TU382809 | lncRNA | downstream | 77293 | 19660616 ~ 19661232 (+) | True | G323249 |
| TU382947 | lncRNA | downstream | 264676 | 19847999 ~ 19914015 (+) | True | G323358 |
| TU383072 | lncRNA | downstream | 545930 | 20129253 ~ 20186501 (+) | False | clcn2a |
| TU383073 | lncRNA | downstream | 545930 | 20129253 ~ 20243398 (+) | False | clcn2a |
| XM_026946140.2 | mRNA | upstream | 221056 | 19356412 ~ 19361261 (+) | True | ptger4c |
| XM_026946130.2 | mRNA | upstream | 266111 | 19313860 ~ 19316206 (+) | True | LOC113546339 |
| XM_026946329.2 | mRNA | upstream | 285054 | 19284612 ~ 19297263 (+) | False | dmbx1a |
| XM_034314617.1 | mRNA | upstream | 285054 | 19284612 ~ 19297263 (+) | True | dmbx1a |
| XM_026946342.2 | mRNA | upstream | 362088 | 19204658 ~ 19220229 (+) | True | gng12a |
| XM_026946175.2 | mRNA | downstream | 474264 | 20057587 ~ 20062476 (+) | True | glula |
| XM_034314586.1 | mRNA | downstream | 555621 | 20138944 ~ 20150410 (+) | True | elovl1a |
| XM_026946357.2 | mRNA | downstream | 555622 | 20138945 ~ 20150229 (+) | False | elovl1a |
| XM_034314582.1 | mRNA | downstream | 573995 | 20157318 ~ 20180634 (+) | False | cc2d1b |
| XM_034314584.1 | mRNA | downstream | 574656 | 20157979 ~ 20180634 (+) | True | cc2d1b |
| XR_004580282.1 | other | upstream | 710957 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 1159686 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU381774 | other | upstream | 1355084 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
| TU381775 | other | upstream | 1355181 | 18226562 ~ 18227136 (+) | False | si:ch211-162e15.3 |
| XR_003404718.2 | other | upstream | 1950709 | 17570649 ~ 17631608 (+) | False | egfra |
| TU383181 | other | downstream | 855379 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 1054261 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 1332081 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| TU383298 | other | downstream | 1437866 | 21021189 ~ 21136847 (+) | True | G323615 |
| TU383295 | other | downstream | 1551796 | 21135119 ~ 21136847 (+) | False | G323615 |
