Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383145 |
| length | 811 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | G323504 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 20380197 ~ 20417484 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383135 | lncRNA | upstream | 1766 | 20376933 ~ 20398720 (+) | True | G323501 |
| TU383137 | lncRNA | upstream | 4797 | 20362301 ~ 20395689 (+) | True | G323502 |
| TU383134 | lncRNA | upstream | 6774 | 20359967 ~ 20393712 (+) | True | G323500 |
| TU383131 | lncRNA | upstream | 7336 | 20318957 ~ 20393150 (+) | True | G323499 |
| TU383114 | lncRNA | upstream | 47317 | 20332605 ~ 20353169 (+) | True | G323486 |
| TU383166 | lncRNA | downstream | 88 | 20417572 ~ 20442370 (+) | True | G323524 |
| TU383140 | lncRNA | downstream | 16995 | 20434479 ~ 20449327 (+) | True | G323503 |
| TU383184 | lncRNA | downstream | 32489 | 20449973 ~ 20450892 (+) | True | G323536 |
| XR_004580291.1 | lncRNA | downstream | 59488 | 20476972 ~ 20478345 (+) | True | LOC117599946 |
| TU383194 | lncRNA | downstream | 59512 | 20476996 ~ 20478345 (+) | False | LOC117599946 |
| XM_034314809.1 | mRNA | upstream | 119419 | 20238226 ~ 20281067 (+) | False | clcn2a |
| XM_034314811.1 | mRNA | upstream | 119419 | 20243317 ~ 20281067 (+) | True | clcn2a |
| XM_034314812.1 | mRNA | upstream | 119419 | 20256343 ~ 20281067 (+) | False | clcn2a |
| XM_034314581.1 | mRNA | upstream | 219852 | 20157979 ~ 20180634 (+) | False | cc2d1b |
| XM_034297730.1 | mRNA | downstream | 52041 | 20469525 ~ 20476964 (+) | True | zgc:110269 |
| XM_034297731.1 | mRNA | downstream | 88200 | 20505684 ~ 20525922 (+) | True | lifra |
| XM_034297732.1 | mRNA | downstream | 114516 | 20532000 ~ 20572338 (+) | True | spef2 |
| XM_034297733.1 | mRNA | downstream | 155078 | 20572562 ~ 20589458 (+) | True | atr |
| XM_026911357.2 | mRNA | downstream | 175382 | 20592866 ~ 20602531 (+) | True | amer3 |
| XR_004580282.1 | other | upstream | 1529126 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 1977855 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU381774 | other | upstream | 2173253 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
| TU381775 | other | upstream | 2173350 | 18226562 ~ 18227136 (+) | False | si:ch211-162e15.3 |
| XR_003404718.2 | other | upstream | 2768878 | 17570649 ~ 17631608 (+) | False | egfra |
| TU383181 | other | downstream | 21218 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 220100 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 497920 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| TU383298 | other | downstream | 603705 | 21021189 ~ 21136847 (+) | True | G323615 |
| TU383295 | other | downstream | 717635 | 21135119 ~ 21136847 (+) | False | G323615 |
