Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383318 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G323625 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 21026421 ~ 21037720 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580335.1 | lncRNA | upstream | 1865 | 21024172 ~ 21024556 (+) | True | LOC117599988 |
| TU383316 | lncRNA | upstream | 2343 | 20967513 ~ 21024078 (+) | True | G323624 |
| TU383279 | lncRNA | upstream | 80342 | 20933232 ~ 20946079 (+) | True | G323603 |
| TU383246 | lncRNA | upstream | 321227 | 20672934 ~ 20705194 (+) | True | G323578 |
| TU383242 | lncRNA | upstream | 353967 | 20671728 ~ 20672454 (+) | True | G323577 |
| TU383351 | lncRNA | downstream | 2889 | 21040609 ~ 21056813 (+) | True | G323649 |
| TU383347 | lncRNA | downstream | 5247 | 21042967 ~ 21043991 (+) | True | G323646 |
| TU383352 | lncRNA | downstream | 15602 | 21053322 ~ 21063269 (+) | True | G323650 |
| TU383361 | lncRNA | downstream | 32699 | 21070419 ~ 21088441 (+) | True | G323659 |
| TU383363 | lncRNA | downstream | 49224 | 21086944 ~ 21093378 (+) | True | G323661 |
| XM_034314548.1 | mRNA | upstream | 34817 | 20980749 ~ 20991604 (+) | True | LOC113524959 |
| XM_034314550.1 | mRNA | upstream | 34817 | 20980749 ~ 20991604 (+) | False | LOC113524959 |
| XM_034314549.1 | mRNA | upstream | 34819 | 20980749 ~ 20991602 (+) | False | LOC113524959 |
| XM_026911369.2 | mRNA | upstream | 133424 | 20886260 ~ 20892997 (+) | True | tecrl2b |
| XM_034297735.1 | mRNA | upstream | 142815 | 20807627 ~ 20883606 (+) | True | col11a1b |
| XM_034297793.1 | mRNA | downstream | 88153 | 21125873 ~ 21127829 (+) | True | LOC117595742 |
| trnap-ugg_22 | other | upstream | 110946 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| XR_004580310.1 | other | upstream | 367010 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| TU383181 | other | upstream | 585860 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580282.1 | other | upstream | 2155061 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 2603790 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU383295 | other | downstream | 97399 | 21135119 ~ 21136847 (+) | False | G323615 |
| trnap-ugg_23 | other | downstream | 104557 | 21142277 ~ 21142348 (+) | True | trnap-ugg_23 |
| trnai-aau_18 | other | downstream | 109230 | 21146950 ~ 21147023 (+) | True | trnai-aau_18 |
