Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383340 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 3 |
| gene id | G323643 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 21026825 ~ 21089934 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580335.1 | lncRNA | upstream | 2269 | 21024172 ~ 21024556 (+) | True | LOC117599988 |
| TU383316 | lncRNA | upstream | 2747 | 20967513 ~ 21024078 (+) | True | G323624 |
| TU383279 | lncRNA | upstream | 80746 | 20933232 ~ 20946079 (+) | True | G323603 |
| TU383246 | lncRNA | upstream | 321631 | 20672934 ~ 20705194 (+) | True | G323578 |
| TU383242 | lncRNA | upstream | 354371 | 20671728 ~ 20672454 (+) | True | G323577 |
| TU383371 | lncRNA | downstream | 15510 | 21105444 ~ 21119416 (+) | True | G323669 |
| TU383309 | lncRNA | downstream | 40299 | 21130233 ~ 21132361 (+) | True | G323621 |
| TU383380 | lncRNA | downstream | 43512 | 21133446 ~ 21134459 (+) | True | G323676 |
| TU383296 | lncRNA | downstream | 45185 | 21135119 ~ 21142041 (+) | False | G323615 |
| TU383300 | lncRNA | downstream | 45185 | 21135119 ~ 21150783 (+) | False | G323615 |
| XM_034314548.1 | mRNA | upstream | 35221 | 20980749 ~ 20991604 (+) | True | LOC113524959 |
| XM_034314550.1 | mRNA | upstream | 35221 | 20980749 ~ 20991604 (+) | False | LOC113524959 |
| XM_034314549.1 | mRNA | upstream | 35223 | 20980749 ~ 20991602 (+) | False | LOC113524959 |
| XM_026911369.2 | mRNA | upstream | 133828 | 20886260 ~ 20892997 (+) | True | tecrl2b |
| XM_034297735.1 | mRNA | upstream | 143219 | 20807627 ~ 20883606 (+) | True | col11a1b |
| XM_034297793.1 | mRNA | downstream | 35939 | 21125873 ~ 21127829 (+) | True | LOC117595742 |
| trnap-ugg_22 | other | upstream | 111350 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| XR_004580310.1 | other | upstream | 367414 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| TU383181 | other | upstream | 586264 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580282.1 | other | upstream | 2155465 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 2604194 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU383295 | other | downstream | 45185 | 21135119 ~ 21136847 (+) | False | G323615 |
| trnap-ugg_23 | other | downstream | 52343 | 21142277 ~ 21142348 (+) | True | trnap-ugg_23 |
| trnai-aau_18 | other | downstream | 57016 | 21146950 ~ 21147023 (+) | True | trnai-aau_18 |
