Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383352 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G323650 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 21053322 ~ 21063269 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383348 | lncRNA | upstream | 7990 | 21036294 ~ 21045332 (+) | True | G323647 |
| TU383346 | lncRNA | upstream | 9331 | 21035025 ~ 21043991 (+) | False | G323646 |
| TU383347 | lncRNA | upstream | 9331 | 21042967 ~ 21043991 (+) | True | G323646 |
| TU383341 | lncRNA | upstream | 10904 | 21032878 ~ 21042418 (+) | True | G323644 |
| TU383317 | lncRNA | upstream | 15602 | 21026421 ~ 21037720 (+) | True | G323625 |
| TU383361 | lncRNA | downstream | 7150 | 21070419 ~ 21088441 (+) | True | G323659 |
| TU383363 | lncRNA | downstream | 23675 | 21086944 ~ 21093378 (+) | True | G323661 |
| TU383371 | lncRNA | downstream | 42175 | 21105444 ~ 21119416 (+) | True | G323669 |
| TU383309 | lncRNA | downstream | 66964 | 21130233 ~ 21132361 (+) | True | G323621 |
| TU383380 | lncRNA | downstream | 70177 | 21133446 ~ 21134459 (+) | True | G323676 |
| XM_034314548.1 | mRNA | upstream | 61718 | 20980749 ~ 20991604 (+) | True | LOC113524959 |
| XM_034314550.1 | mRNA | upstream | 61718 | 20980749 ~ 20991604 (+) | False | LOC113524959 |
| XM_034314549.1 | mRNA | upstream | 61720 | 20980749 ~ 20991602 (+) | False | LOC113524959 |
| XM_026911369.2 | mRNA | upstream | 160325 | 20886260 ~ 20892997 (+) | True | tecrl2b |
| XM_034297735.1 | mRNA | upstream | 169716 | 20807627 ~ 20883606 (+) | True | col11a1b |
| XM_034297793.1 | mRNA | downstream | 62604 | 21125873 ~ 21127829 (+) | True | LOC117595742 |
| trnap-ugg_22 | other | upstream | 137847 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| XR_004580310.1 | other | upstream | 393911 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| TU383181 | other | upstream | 612761 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580282.1 | other | upstream | 2181962 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 2630691 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU383295 | other | downstream | 71850 | 21135119 ~ 21136847 (+) | False | G323615 |
| trnap-ugg_23 | other | downstream | 79008 | 21142277 ~ 21142348 (+) | True | trnap-ugg_23 |
| trnai-aau_18 | other | downstream | 83681 | 21146950 ~ 21147023 (+) | True | trnai-aau_18 |
